Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Gm9988-201ENSMUST00000069786 435 ntBASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim4Q8C1Q6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Grk6-206ENSMUST00000224995 2971 ntBASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim4Q8C1Q6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim4Q8C1Q6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim4Q8C1Q6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim4Q8C1Q6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim4Q8C1Q6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Smim4Q8C1Q6 Rarb-207ENSMUST00000225921 2756 ntBASIC15.28■□□□□ 0.04
Smim4Q8C1Q6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim4Q8C1Q6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim4Q8C1Q6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smim4Q8C1Q6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim4Q8C1Q6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smim4Q8C1Q6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smim4Q8C1Q6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim4Q8C1Q6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim4Q8C1Q6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim4Q8C1Q6 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.28■□□□□ 0.04
Smim4Q8C1Q6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.27■□□□□ 0.04
Smim4Q8C1Q6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smim4Q8C1Q6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.27■□□□□ 0.04
Smim4Q8C1Q6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smim4Q8C1Q6 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.27■□□□□ 0.04
Smim4Q8C1Q6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smim4Q8C1Q6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smim4Q8C1Q6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smim4Q8C1Q6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smim4Q8C1Q6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.27■□□□□ 0.04
Smim4Q8C1Q6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Smim4Q8C1Q6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms