Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trub1Q8C0D0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trub1Q8C0D0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trub1Q8C0D0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trub1Q8C0D0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trub1Q8C0D0 Fst-202ENSMUST00000223640 2612 ntBASIC18.83■□□□□ 0.61
Trub1Q8C0D0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trub1Q8C0D0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Trub1Q8C0D0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Trub1Q8C0D0 Gm7290-201ENSMUST00000104990 617 ntBASIC18.83■□□□□ 0.6
Trub1Q8C0D0 Gm12918-201ENSMUST00000120234 636 ntBASIC18.83■□□□□ 0.6
Trub1Q8C0D0 Gm15710-201ENSMUST00000121821 636 ntBASIC18.83■□□□□ 0.6
Trub1Q8C0D0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trub1Q8C0D0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trub1Q8C0D0 Gm5075-201ENSMUST00000196916 622 ntBASIC18.83■□□□□ 0.6
Trub1Q8C0D0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.83■□□□□ 0.6
Trub1Q8C0D0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trub1Q8C0D0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.83■□□□□ 0.6
Trub1Q8C0D0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.83■□□□□ 0.6
Trub1Q8C0D0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Trub1Q8C0D0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trub1Q8C0D0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trub1Q8C0D0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trub1Q8C0D0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Trub1Q8C0D0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trub1Q8C0D0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.82■□□□□ 0.6
Trub1Q8C0D0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trub1Q8C0D0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trub1Q8C0D0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trub1Q8C0D0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trub1Q8C0D0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trub1Q8C0D0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trub1Q8C0D0 Gm7291-201ENSMUST00000199147 382 ntBASIC18.82■□□□□ 0.6
Trub1Q8C0D0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trub1Q8C0D0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trub1Q8C0D0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trub1Q8C0D0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trub1Q8C0D0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trub1Q8C0D0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trub1Q8C0D0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.82■□□□□ 0.6
Trub1Q8C0D0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trub1Q8C0D0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trub1Q8C0D0 Tgds-204ENSMUST00000228543 1594 ntBASIC18.81■□□□□ 0.6
Trub1Q8C0D0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trub1Q8C0D0 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.81■□□□□ 0.6
Trub1Q8C0D0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.81■□□□□ 0.6
Trub1Q8C0D0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trub1Q8C0D0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.81■□□□□ 0.6
Trub1Q8C0D0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trub1Q8C0D0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trub1Q8C0D0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trub1Q8C0D0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trub1Q8C0D0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trub1Q8C0D0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.81■□□□□ 0.6
Trub1Q8C0D0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trub1Q8C0D0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Trub1Q8C0D0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.8■□□□□ 0.6
Trub1Q8C0D0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trub1Q8C0D0 Gm6211-202ENSMUST00000167849 925 ntBASIC18.8■□□□□ 0.6
Trub1Q8C0D0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trub1Q8C0D0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Trub1Q8C0D0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trub1Q8C0D0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.8■□□□□ 0.6
Trub1Q8C0D0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trub1Q8C0D0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.8■□□□□ 0.6
Trub1Q8C0D0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trub1Q8C0D0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trub1Q8C0D0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trub1Q8C0D0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trub1Q8C0D0 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.78■□□□□ 0.6
Trub1Q8C0D0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.78■□□□□ 0.6
Trub1Q8C0D0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trub1Q8C0D0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.78■□□□□ 0.6
Trub1Q8C0D0 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.78■□□□□ 0.6
Trub1Q8C0D0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trub1Q8C0D0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trub1Q8C0D0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trub1Q8C0D0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms