Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab11fip4Q8BQP8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip4Q8BQP8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip4Q8BQP8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip4Q8BQP8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rab11fip4Q8BQP8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Rab11fip4Q8BQP8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip4Q8BQP8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip4Q8BQP8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rab11fip4Q8BQP8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.2■□□□□ 0.82
Rab11fip4Q8BQP8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip4Q8BQP8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip4Q8BQP8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rab11fip4Q8BQP8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab11fip4Q8BQP8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Rab11fip4Q8BQP8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rab11fip4Q8BQP8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rab11fip4Q8BQP8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab11fip4Q8BQP8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rab11fip4Q8BQP8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rab11fip4Q8BQP8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab11fip4Q8BQP8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab11fip4Q8BQP8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab11fip4Q8BQP8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab11fip4Q8BQP8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab11fip4Q8BQP8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab11fip4Q8BQP8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Rab11fip4Q8BQP8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab11fip4Q8BQP8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
Rab11fip4Q8BQP8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rab11fip4Q8BQP8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rab11fip4Q8BQP8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Rab11fip4Q8BQP8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab11fip4Q8BQP8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.18■□□□□ 0.82
Rab11fip4Q8BQP8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab11fip4Q8BQP8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.18■□□□□ 0.82
Rab11fip4Q8BQP8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab11fip4Q8BQP8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.17■□□□□ 0.82
Rab11fip4Q8BQP8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Rab11fip4Q8BQP8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.17■□□□□ 0.82
Rab11fip4Q8BQP8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Rab11fip4Q8BQP8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab11fip4Q8BQP8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.17■□□□□ 0.82
Rab11fip4Q8BQP8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab11fip4Q8BQP8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 Gm12527-201ENSMUST00000117967 564 ntBASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab11fip4Q8BQP8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab11fip4Q8BQP8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab11fip4Q8BQP8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab11fip4Q8BQP8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab11fip4Q8BQP8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab11fip4Q8BQP8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab11fip4Q8BQP8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.15■□□□□ 0.82
Rab11fip4Q8BQP8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Rab11fip4Q8BQP8 Gm22240-201ENSMUST00000175225 82 ntBASIC20.15■□□□□ 0.82
Rab11fip4Q8BQP8 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.15■□□□□ 0.82
Rab11fip4Q8BQP8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rab11fip4Q8BQP8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab11fip4Q8BQP8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.14■□□□□ 0.82
Rab11fip4Q8BQP8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rab11fip4Q8BQP8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rab11fip4Q8BQP8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab11fip4Q8BQP8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rab11fip4Q8BQP8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab11fip4Q8BQP8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rab11fip4Q8BQP8 Gm8520-201ENSMUST00000186517 868 ntBASIC20.14■□□□□ 0.81
Rab11fip4Q8BQP8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rab11fip4Q8BQP8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab11fip4Q8BQP8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab11fip4Q8BQP8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip4Q8BQP8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.13■□□□□ 0.81
Rab11fip4Q8BQP8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip4Q8BQP8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip4Q8BQP8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip4Q8BQP8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Rab11fip4Q8BQP8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip4Q8BQP8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip4Q8BQP8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.13■□□□□ 0.81
Rab11fip4Q8BQP8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip4Q8BQP8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.13■□□□□ 0.81
Rab11fip4Q8BQP8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip4Q8BQP8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Rab11fip4Q8BQP8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms