Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Fst-202ENSMUST00000223640 2612 ntBASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp2bQ8BJF9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Chmp2bQ8BJF9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp2bQ8BJF9 Gm43060-201ENSMUST00000200621 289 ntBASIC18.68■□□□□ 0.58
Chmp2bQ8BJF9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp2bQ8BJF9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp2bQ8BJF9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp2bQ8BJF9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp2bQ8BJF9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.68■□□□□ 0.58
Chmp2bQ8BJF9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp2bQ8BJF9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp2bQ8BJF9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp2bQ8BJF9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp2bQ8BJF9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp2bQ8BJF9 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.67■□□□□ 0.58
Chmp2bQ8BJF9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.67■□□□□ 0.58
Chmp2bQ8BJF9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp2bQ8BJF9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.67■□□□□ 0.58
Chmp2bQ8BJF9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp2bQ8BJF9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.67■□□□□ 0.58
Chmp2bQ8BJF9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Chmp2bQ8BJF9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp2bQ8BJF9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp2bQ8BJF9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Chmp2bQ8BJF9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2bQ8BJF9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2bQ8BJF9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2bQ8BJF9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2bQ8BJF9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2bQ8BJF9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Chmp2bQ8BJF9 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.66■□□□□ 0.58
Chmp2bQ8BJF9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2bQ8BJF9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2bQ8BJF9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Chmp2bQ8BJF9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2bQ8BJF9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp2bQ8BJF9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.65■□□□□ 0.58
Chmp2bQ8BJF9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp2bQ8BJF9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp2bQ8BJF9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.65■□□□□ 0.58
Chmp2bQ8BJF9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp2bQ8BJF9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Chmp2bQ8BJF9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp2bQ8BJF9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp2bQ8BJF9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp2bQ8BJF9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp2bQ8BJF9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp2bQ8BJF9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp2bQ8BJF9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp2bQ8BJF9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.64■□□□□ 0.57
Chmp2bQ8BJF9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp2bQ8BJF9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Chmp2bQ8BJF9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Chmp2bQ8BJF9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp2bQ8BJF9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp2bQ8BJF9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.64■□□□□ 0.57
Chmp2bQ8BJF9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp2bQ8BJF9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp2bQ8BJF9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp2bQ8BJF9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.64■□□□□ 0.57
Chmp2bQ8BJF9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp2bQ8BJF9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp2bQ8BJF9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp2bQ8BJF9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp2bQ8BJF9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp2bQ8BJF9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp2bQ8BJF9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Chmp2bQ8BJF9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Chmp2bQ8BJF9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp2bQ8BJF9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Chmp2bQ8BJF9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.63■□□□□ 0.57
Chmp2bQ8BJF9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp2bQ8BJF9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms