Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smndc1Q8BGT7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smndc1Q8BGT7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smndc1Q8BGT7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Smndc1Q8BGT7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smndc1Q8BGT7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smndc1Q8BGT7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smndc1Q8BGT7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smndc1Q8BGT7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smndc1Q8BGT7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smndc1Q8BGT7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smndc1Q8BGT7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smndc1Q8BGT7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smndc1Q8BGT7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smndc1Q8BGT7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Smndc1Q8BGT7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smndc1Q8BGT7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Smndc1Q8BGT7 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.66■□□□□ 0.42
Smndc1Q8BGT7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smndc1Q8BGT7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smndc1Q8BGT7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smndc1Q8BGT7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Smndc1Q8BGT7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smndc1Q8BGT7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smndc1Q8BGT7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smndc1Q8BGT7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smndc1Q8BGT7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.65■□□□□ 0.42
Smndc1Q8BGT7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smndc1Q8BGT7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Smndc1Q8BGT7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smndc1Q8BGT7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smndc1Q8BGT7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smndc1Q8BGT7 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.65■□□□□ 0.42
Smndc1Q8BGT7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smndc1Q8BGT7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smndc1Q8BGT7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smndc1Q8BGT7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smndc1Q8BGT7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smndc1Q8BGT7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Smndc1Q8BGT7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smndc1Q8BGT7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smndc1Q8BGT7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smndc1Q8BGT7 Gm12251-201ENSMUST00000117893 792 ntBASIC17.64■□□□□ 0.41
Smndc1Q8BGT7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.64■□□□□ 0.41
Smndc1Q8BGT7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smndc1Q8BGT7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smndc1Q8BGT7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
Smndc1Q8BGT7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smndc1Q8BGT7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smndc1Q8BGT7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.64■□□□□ 0.41
Smndc1Q8BGT7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smndc1Q8BGT7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.64■□□□□ 0.41
Smndc1Q8BGT7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smndc1Q8BGT7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smndc1Q8BGT7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smndc1Q8BGT7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smndc1Q8BGT7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smndc1Q8BGT7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smndc1Q8BGT7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smndc1Q8BGT7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smndc1Q8BGT7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smndc1Q8BGT7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smndc1Q8BGT7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smndc1Q8BGT7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smndc1Q8BGT7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.63■□□□□ 0.41
Smndc1Q8BGT7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smndc1Q8BGT7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smndc1Q8BGT7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smndc1Q8BGT7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smndc1Q8BGT7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smndc1Q8BGT7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.62■□□□□ 0.41
Smndc1Q8BGT7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smndc1Q8BGT7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smndc1Q8BGT7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smndc1Q8BGT7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.62■□□□□ 0.41
Smndc1Q8BGT7 Spcs1-204ENSMUST00000226782 949 ntBASIC17.62■□□□□ 0.41
Smndc1Q8BGT7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Smndc1Q8BGT7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smndc1Q8BGT7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms