Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Samm50Q8BGH2 Gm42900-201ENSMUST00000197184 2167 ntBASIC21.37■■□□□ 1.01
Samm50Q8BGH2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
Samm50Q8BGH2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Samm50Q8BGH2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Samm50Q8BGH2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.37■■□□□ 1.01
Samm50Q8BGH2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Samm50Q8BGH2 Gm29257-201ENSMUST00000186115 639 ntBASIC21.37■■□□□ 1.01
Samm50Q8BGH2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Samm50Q8BGH2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Samm50Q8BGH2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Samm50Q8BGH2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.37■■□□□ 1.01
Samm50Q8BGH2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Samm50Q8BGH2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Samm50Q8BGH2 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.36■■□□□ 1.01
Samm50Q8BGH2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Samm50Q8BGH2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Samm50Q8BGH2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Samm50Q8BGH2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Samm50Q8BGH2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Samm50Q8BGH2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Samm50Q8BGH2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Samm50Q8BGH2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Samm50Q8BGH2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Samm50Q8BGH2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Samm50Q8BGH2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Samm50Q8BGH2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Samm50Q8BGH2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Samm50Q8BGH2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Samm50Q8BGH2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Samm50Q8BGH2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Samm50Q8BGH2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Samm50Q8BGH2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Samm50Q8BGH2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Samm50Q8BGH2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Samm50Q8BGH2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Samm50Q8BGH2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.34■■□□□ 1.01
Samm50Q8BGH2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Samm50Q8BGH2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Samm50Q8BGH2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.34■■□□□ 1.01
Samm50Q8BGH2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.34■■□□□ 1.01
Samm50Q8BGH2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
Samm50Q8BGH2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Samm50Q8BGH2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Samm50Q8BGH2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.34■■□□□ 1.01
Samm50Q8BGH2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Samm50Q8BGH2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Samm50Q8BGH2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Samm50Q8BGH2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Samm50Q8BGH2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Samm50Q8BGH2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Samm50Q8BGH2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Samm50Q8BGH2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.33■■□□□ 1.01
Samm50Q8BGH2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.33■■□□□ 1.01
Samm50Q8BGH2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Samm50Q8BGH2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Samm50Q8BGH2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Samm50Q8BGH2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Samm50Q8BGH2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Samm50Q8BGH2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.33■■□□□ 1
Samm50Q8BGH2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Samm50Q8BGH2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.32■■□□□ 1
Samm50Q8BGH2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.32■■□□□ 1
Samm50Q8BGH2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Samm50Q8BGH2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Samm50Q8BGH2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.31■■□□□ 1
Samm50Q8BGH2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Samm50Q8BGH2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.31■■□□□ 1
Samm50Q8BGH2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Samm50Q8BGH2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC21.31■■□□□ 1
Samm50Q8BGH2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.3■■□□□ 1
Samm50Q8BGH2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Samm50Q8BGH2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Samm50Q8BGH2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.3■■□□□ 1
Samm50Q8BGH2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.3■■□□□ 1
Samm50Q8BGH2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.3■■□□□ 1
Samm50Q8BGH2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Samm50Q8BGH2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.3■■□□□ 1
Samm50Q8BGH2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC21.3■■□□□ 1
Samm50Q8BGH2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Samm50Q8BGH2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Samm50Q8BGH2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Samm50Q8BGH2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Samm50Q8BGH2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Samm50Q8BGH2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Samm50Q8BGH2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Samm50Q8BGH2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.29■■□□□ 1
Samm50Q8BGH2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.29■■□□□ 1
Samm50Q8BGH2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Samm50Q8BGH2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Samm50Q8BGH2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Samm50Q8BGH2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Samm50Q8BGH2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Samm50Q8BGH2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Samm50Q8BGH2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Samm50Q8BGH2 Gm13534-201ENSMUST00000121169 513 ntBASIC21.28■■□□□ 1
Samm50Q8BGH2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.28■■□□□ 1
Samm50Q8BGH2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Samm50Q8BGH2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Samm50Q8BGH2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms