Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim65Q8BFW4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim65Q8BFW4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim65Q8BFW4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim65Q8BFW4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim65Q8BFW4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim65Q8BFW4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim65Q8BFW4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim65Q8BFW4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim65Q8BFW4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim65Q8BFW4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim65Q8BFW4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim65Q8BFW4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim65Q8BFW4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim65Q8BFW4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trim65Q8BFW4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.55■□□□□ 0.72
Trim65Q8BFW4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Trim65Q8BFW4 Gm7290-201ENSMUST00000104990 617 ntBASIC19.55■□□□□ 0.72
Trim65Q8BFW4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.55■□□□□ 0.72
Trim65Q8BFW4 Gm12918-201ENSMUST00000120234 636 ntBASIC19.55■□□□□ 0.72
Trim65Q8BFW4 Gm15710-201ENSMUST00000121821 636 ntBASIC19.55■□□□□ 0.72
Trim65Q8BFW4 Gm5075-201ENSMUST00000196916 622 ntBASIC19.55■□□□□ 0.72
Trim65Q8BFW4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.55■□□□□ 0.72
Trim65Q8BFW4 Fst-202ENSMUST00000223640 2612 ntBASIC19.55■□□□□ 0.72
Trim65Q8BFW4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.55■□□□□ 0.72
Trim65Q8BFW4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.55■□□□□ 0.72
Trim65Q8BFW4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim65Q8BFW4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim65Q8BFW4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim65Q8BFW4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim65Q8BFW4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim65Q8BFW4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim65Q8BFW4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Trim65Q8BFW4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim65Q8BFW4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim65Q8BFW4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim65Q8BFW4 Gm37179-201ENSMUST00000194862 823 ntBASIC19.54■□□□□ 0.72
Trim65Q8BFW4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.54■□□□□ 0.72
Trim65Q8BFW4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Trim65Q8BFW4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim65Q8BFW4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim65Q8BFW4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim65Q8BFW4 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.54■□□□□ 0.72
Trim65Q8BFW4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trim65Q8BFW4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim65Q8BFW4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim65Q8BFW4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.54■□□□□ 0.72
Trim65Q8BFW4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Gm22325-201ENSMUST00000158904 308 ntBASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim65Q8BFW4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Grk6-206ENSMUST00000224995 2971 ntBASIC19.53■□□□□ 0.72
Trim65Q8BFW4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Trim65Q8BFW4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim65Q8BFW4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim65Q8BFW4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim65Q8BFW4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim65Q8BFW4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim65Q8BFW4 Gm6211-202ENSMUST00000167849 925 ntBASIC19.52■□□□□ 0.72
Trim65Q8BFW4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.52■□□□□ 0.72
Trim65Q8BFW4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim65Q8BFW4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim65Q8BFW4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim65Q8BFW4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim65Q8BFW4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim65Q8BFW4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim65Q8BFW4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.52■□□□□ 0.71
Trim65Q8BFW4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim65Q8BFW4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim65Q8BFW4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim65Q8BFW4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trim65Q8BFW4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim65Q8BFW4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.51■□□□□ 0.71
Trim65Q8BFW4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim65Q8BFW4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trim65Q8BFW4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim65Q8BFW4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim65Q8BFW4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.51■□□□□ 0.71
Trim65Q8BFW4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Trim65Q8BFW4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.51■□□□□ 0.71
Trim65Q8BFW4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim65Q8BFW4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim65Q8BFW4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Trim65Q8BFW4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim65Q8BFW4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms