Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Scn10aQ6QIY3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn10aQ6QIY3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn10aQ6QIY3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn10aQ6QIY3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn10aQ6QIY3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.91■□□□□ 0.94
Scn10aQ6QIY3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.91■□□□□ 0.94
Scn10aQ6QIY3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn10aQ6QIY3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn10aQ6QIY3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Scn10aQ6QIY3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn10aQ6QIY3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Gm9103-201ENSMUST00000119371 405 ntBASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Gm17971-201ENSMUST00000190239 806 ntBASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Scn10aQ6QIY3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Scn10aQ6QIY3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scn10aQ6QIY3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.89■□□□□ 0.93
Scn10aQ6QIY3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn10aQ6QIY3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Scn10aQ6QIY3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn10aQ6QIY3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn10aQ6QIY3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn10aQ6QIY3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn10aQ6QIY3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.88■□□□□ 0.93
Scn10aQ6QIY3 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.88■□□□□ 0.93
Scn10aQ6QIY3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn10aQ6QIY3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Scn10aQ6QIY3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn10aQ6QIY3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn10aQ6QIY3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Scn10aQ6QIY3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Scn10aQ6QIY3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn10aQ6QIY3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.88■□□□□ 0.93
Scn10aQ6QIY3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.88■□□□□ 0.93
Scn10aQ6QIY3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn10aQ6QIY3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn10aQ6QIY3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn10aQ6QIY3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn10aQ6QIY3 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.87■□□□□ 0.93
Scn10aQ6QIY3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.87■□□□□ 0.93
Scn10aQ6QIY3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.87■□□□□ 0.93
Scn10aQ6QIY3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Scn10aQ6QIY3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.87■□□□□ 0.93
Scn10aQ6QIY3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Scn10aQ6QIY3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Scn10aQ6QIY3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn10aQ6QIY3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
Scn10aQ6QIY3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn10aQ6QIY3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn10aQ6QIY3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scn10aQ6QIY3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn10aQ6QIY3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.86■□□□□ 0.93
Scn10aQ6QIY3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scn10aQ6QIY3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn10aQ6QIY3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Scn10aQ6QIY3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Scn10aQ6QIY3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn10aQ6QIY3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.85■□□□□ 0.93
Scn10aQ6QIY3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn10aQ6QIY3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn10aQ6QIY3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn10aQ6QIY3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scn10aQ6QIY3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Scn10aQ6QIY3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Scn10aQ6QIY3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Scn10aQ6QIY3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.85■□□□□ 0.93
Scn10aQ6QIY3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn10aQ6QIY3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Scn10aQ6QIY3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn10aQ6QIY3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn10aQ6QIY3 Gm7284-201ENSMUST00000131667 944 ntBASIC20.84■□□□□ 0.93
Scn10aQ6QIY3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scn10aQ6QIY3 Mir5130-201ENSMUST00000175160 84 ntBASIC20.84■□□□□ 0.93
Scn10aQ6QIY3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn10aQ6QIY3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn10aQ6QIY3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scn10aQ6QIY3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn10aQ6QIY3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Scn10aQ6QIY3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn10aQ6QIY3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn10aQ6QIY3 Gm2274-201ENSMUST00000184539 609 ntBASIC20.83■□□□□ 0.93
Scn10aQ6QIY3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn10aQ6QIY3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms