Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.71■■□□□ 1.07
Nup98Q6PFD9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nup98Q6PFD9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nup98Q6PFD9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nup98Q6PFD9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nup98Q6PFD9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Nup98Q6PFD9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nup98Q6PFD9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Nup98Q6PFD9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nup98Q6PFD9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.7■■□□□ 1.07
Nup98Q6PFD9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nup98Q6PFD9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.7■■□□□ 1.06
Nup98Q6PFD9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nup98Q6PFD9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nup98Q6PFD9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nup98Q6PFD9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Nup98Q6PFD9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nup98Q6PFD9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.7■■□□□ 1.06
Nup98Q6PFD9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.7■■□□□ 1.06
Nup98Q6PFD9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nup98Q6PFD9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.69■■□□□ 1.06
Nup98Q6PFD9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.69■■□□□ 1.06
Nup98Q6PFD9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nup98Q6PFD9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nup98Q6PFD9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nup98Q6PFD9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nup98Q6PFD9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nup98Q6PFD9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.69■■□□□ 1.06
Nup98Q6PFD9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nup98Q6PFD9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nup98Q6PFD9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nup98Q6PFD9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nup98Q6PFD9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nup98Q6PFD9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nup98Q6PFD9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nup98Q6PFD9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nup98Q6PFD9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nup98Q6PFD9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nup98Q6PFD9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.67■■□□□ 1.06
Nup98Q6PFD9 Odf3b-204ENSMUST00000227834 930 ntBASIC21.67■■□□□ 1.06
Nup98Q6PFD9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nup98Q6PFD9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nup98Q6PFD9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nup98Q6PFD9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nup98Q6PFD9 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.67■■□□□ 1.06
Nup98Q6PFD9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nup98Q6PFD9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.66■■□□□ 1.06
Nup98Q6PFD9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nup98Q6PFD9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.66■■□□□ 1.06
Nup98Q6PFD9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nup98Q6PFD9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.66■■□□□ 1.06
Nup98Q6PFD9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Nup98Q6PFD9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.66■■□□□ 1.06
Nup98Q6PFD9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nup98Q6PFD9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nup98Q6PFD9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Nup98Q6PFD9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nup98Q6PFD9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Nup98Q6PFD9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nup98Q6PFD9 Gm9987-201ENSMUST00000069768 567 ntBASIC21.65■■□□□ 1.06
Nup98Q6PFD9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nup98Q6PFD9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nup98Q6PFD9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nup98Q6PFD9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Nup98Q6PFD9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nup98Q6PFD9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nup98Q6PFD9 Gm6433-201ENSMUST00000118634 875 ntBASIC21.64■■□□□ 1.06
Nup98Q6PFD9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Nup98Q6PFD9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Nup98Q6PFD9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
Nup98Q6PFD9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nup98Q6PFD9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.64■■□□□ 1.06
Nup98Q6PFD9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nup98Q6PFD9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nup98Q6PFD9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nup98Q6PFD9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nup98Q6PFD9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nup98Q6PFD9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.64■■□□□ 1.05
Nup98Q6PFD9 Gm7889-201ENSMUST00000185591 958 ntBASIC21.64■■□□□ 1.05
Nup98Q6PFD9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nup98Q6PFD9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nup98Q6PFD9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nup98Q6PFD9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nup98Q6PFD9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.63■■□□□ 1.05
Nup98Q6PFD9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nup98Q6PFD9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nup98Q6PFD9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.63■■□□□ 1.05
Nup98Q6PFD9 Gm11539-201ENSMUST00000119837 557 ntBASIC21.63■■□□□ 1.05
Nup98Q6PFD9 Gm13436-201ENSMUST00000120418 567 ntBASIC21.63■■□□□ 1.05
Nup98Q6PFD9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nup98Q6PFD9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Nup98Q6PFD9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nup98Q6PFD9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nup98Q6PFD9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nup98Q6PFD9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nup98Q6PFD9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.62■■□□□ 1.05
Nup98Q6PFD9 Gm30025-201ENSMUST00000218555 728 ntBASIC21.62■■□□□ 1.05
Nup98Q6PFD9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.62■■□□□ 1.05
Nup98Q6PFD9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nup98Q6PFD9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms