Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.38■□□□□ 0.37
AtmQ62388 Gm6443-201ENSMUST00000203599 874 ntBASIC17.38■□□□□ 0.37
AtmQ62388 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.38■□□□□ 0.37
AtmQ62388 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AtmQ62388 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AtmQ62388 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.37■□□□□ 0.37
AtmQ62388 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AtmQ62388 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AtmQ62388 AW822252-206ENSMUST00000208904 237 ntBASIC17.37■□□□□ 0.37
AtmQ62388 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AtmQ62388 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
AtmQ62388 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AtmQ62388 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AtmQ62388 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
AtmQ62388 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
AtmQ62388 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AtmQ62388 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AtmQ62388 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.36■□□□□ 0.37
AtmQ62388 Gm27704-201ENSMUST00000185094 107 ntBASIC17.36■□□□□ 0.37
AtmQ62388 Gm43514-201ENSMUST00000198852 424 ntBASIC17.36■□□□□ 0.37
AtmQ62388 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AtmQ62388 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AtmQ62388 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AtmQ62388 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AtmQ62388 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AtmQ62388 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AtmQ62388 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.36■□□□□ 0.37
AtmQ62388 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AtmQ62388 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AtmQ62388 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
AtmQ62388 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
AtmQ62388 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AtmQ62388 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AtmQ62388 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
AtmQ62388 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
AtmQ62388 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AtmQ62388 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
AtmQ62388 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AtmQ62388 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
AtmQ62388 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.35■□□□□ 0.37
AtmQ62388 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.35■□□□□ 0.37
AtmQ62388 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AtmQ62388 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
AtmQ62388 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AtmQ62388 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
AtmQ62388 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AtmQ62388 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AtmQ62388 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
AtmQ62388 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.34■□□□□ 0.37
AtmQ62388 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AtmQ62388 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
AtmQ62388 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.34■□□□□ 0.37
AtmQ62388 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.34■□□□□ 0.37
AtmQ62388 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.34■□□□□ 0.37
AtmQ62388 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AtmQ62388 Gm12382-201ENSMUST00000122005 922 ntBASIC17.34■□□□□ 0.37
AtmQ62388 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.33■□□□□ 0.37
AtmQ62388 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AtmQ62388 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.33■□□□□ 0.37
AtmQ62388 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.33■□□□□ 0.37
AtmQ62388 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
AtmQ62388 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
AtmQ62388 Gm17807-201ENSMUST00000186869 298 ntBASIC17.33■□□□□ 0.36
AtmQ62388 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AtmQ62388 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AtmQ62388 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AtmQ62388 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
AtmQ62388 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.32■□□□□ 0.36
AtmQ62388 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AtmQ62388 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AtmQ62388 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AtmQ62388 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AtmQ62388 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
AtmQ62388 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AtmQ62388 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AtmQ62388 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AtmQ62388 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
AtmQ62388 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AtmQ62388 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
AtmQ62388 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AtmQ62388 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.31■□□□□ 0.36
AtmQ62388 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AtmQ62388 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
AtmQ62388 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AtmQ62388 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AtmQ62388 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.31■□□□□ 0.36
AtmQ62388 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AtmQ62388 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AtmQ62388 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AtmQ62388 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.31■□□□□ 0.36
AtmQ62388 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AtmQ62388 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
AtmQ62388 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
AtmQ62388 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
AtmQ62388 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AtmQ62388 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AtmQ62388 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
AtmQ62388 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.3■□□□□ 0.36
AtmQ62388 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AtmQ62388 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms