Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six1Q62231 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.78■□□□□ 0.6
Six1Q62231 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six1Q62231 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.78■□□□□ 0.6
Six1Q62231 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Six1Q62231 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six1Q62231 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Six1Q62231 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six1Q62231 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Six1Q62231 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six1Q62231 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Six1Q62231 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six1Q62231 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six1Q62231 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six1Q62231 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six1Q62231 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six1Q62231 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six1Q62231 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six1Q62231 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Six1Q62231 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six1Q62231 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
Six1Q62231 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six1Q62231 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six1Q62231 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six1Q62231 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Six1Q62231 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Six1Q62231 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Six1Q62231 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Six1Q62231 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Six1Q62231 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.77■□□□□ 0.59
Six1Q62231 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six1Q62231 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six1Q62231 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.76■□□□□ 0.59
Six1Q62231 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six1Q62231 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.76■□□□□ 0.59
Six1Q62231 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Six1Q62231 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six1Q62231 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six1Q62231 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six1Q62231 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Six1Q62231 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six1Q62231 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.76■□□□□ 0.59
Six1Q62231 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six1Q62231 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six1Q62231 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six1Q62231 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.75■□□□□ 0.59
Six1Q62231 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six1Q62231 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.75■□□□□ 0.59
Six1Q62231 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six1Q62231 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Six1Q62231 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six1Q62231 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Six1Q62231 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
Six1Q62231 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.75■□□□□ 0.59
Six1Q62231 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.75■□□□□ 0.59
Six1Q62231 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Six1Q62231 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six1Q62231 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six1Q62231 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six1Q62231 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six1Q62231 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six1Q62231 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Six1Q62231 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six1Q62231 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.74■□□□□ 0.59
Six1Q62231 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.74■□□□□ 0.59
Six1Q62231 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.74■□□□□ 0.59
Six1Q62231 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six1Q62231 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six1Q62231 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Six1Q62231 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six1Q62231 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Six1Q62231 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six1Q62231 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six1Q62231 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Six1Q62231 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six1Q62231 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Six1Q62231 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six1Q62231 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Six1Q62231 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Six1Q62231 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six1Q62231 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.73■□□□□ 0.59
Six1Q62231 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six1Q62231 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Six1Q62231 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.73■□□□□ 0.59
Six1Q62231 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six1Q62231 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Six1Q62231 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six1Q62231 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six1Q62231 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six1Q62231 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six1Q62231 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Six1Q62231 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Six1Q62231 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Six1Q62231 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.72■□□□□ 0.59
Six1Q62231 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Six1Q62231 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Six1Q62231 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Six1Q62231 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Six1Q62231 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Six1Q62231 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms