Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Trim21Q62191 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim21Q62191 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim21Q62191 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim21Q62191 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim21Q62191 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim21Q62191 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Trim21Q62191 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Trim21Q62191 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim21Q62191 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim21Q62191 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim21Q62191 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim21Q62191 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim21Q62191 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim21Q62191 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim21Q62191 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim21Q62191 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim21Q62191 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim21Q62191 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim21Q62191 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim21Q62191 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim21Q62191 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.26■□□□□ 0.67
Trim21Q62191 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim21Q62191 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim21Q62191 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim21Q62191 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.25■□□□□ 0.67
Trim21Q62191 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim21Q62191 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim21Q62191 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim21Q62191 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim21Q62191 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim21Q62191 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim21Q62191 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim21Q62191 Gm13534-201ENSMUST00000121169 513 ntBASIC19.25■□□□□ 0.67
Trim21Q62191 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim21Q62191 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim21Q62191 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim21Q62191 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trim21Q62191 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim21Q62191 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim21Q62191 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trim21Q62191 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim21Q62191 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.24■□□□□ 0.67
Trim21Q62191 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim21Q62191 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim21Q62191 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim21Q62191 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim21Q62191 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim21Q62191 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim21Q62191 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.24■□□□□ 0.67
Trim21Q62191 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Trim21Q62191 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim21Q62191 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim21Q62191 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trim21Q62191 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim21Q62191 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim21Q62191 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim21Q62191 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.23■□□□□ 0.67
Trim21Q62191 Gm42778-201ENSMUST00000199644 553 ntBASIC19.23■□□□□ 0.67
Trim21Q62191 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim21Q62191 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim21Q62191 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim21Q62191 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim21Q62191 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim21Q62191 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim21Q62191 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim21Q62191 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim21Q62191 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim21Q62191 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim21Q62191 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Trim21Q62191 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim21Q62191 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim21Q62191 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.22■□□□□ 0.67
Trim21Q62191 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim21Q62191 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim21Q62191 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim21Q62191 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim21Q62191 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim21Q62191 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim21Q62191 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim21Q62191 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim21Q62191 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trim21Q62191 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim21Q62191 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim21Q62191 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim21Q62191 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim21Q62191 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.22■□□□□ 0.67
Trim21Q62191 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim21Q62191 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim21Q62191 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim21Q62191 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim21Q62191 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim21Q62191 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim21Q62191 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim21Q62191 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim21Q62191 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim21Q62191 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim21Q62191 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim21Q62191 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim21Q62191 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms