Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc6a4Q60857 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc6a4Q60857 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Slc6a4Q60857 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc6a4Q60857 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.73■□□□□ 0.59
Slc6a4Q60857 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc6a4Q60857 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc6a4Q60857 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Slc6a4Q60857 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc6a4Q60857 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc6a4Q60857 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc6a4Q60857 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc6a4Q60857 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.72■□□□□ 0.59
Slc6a4Q60857 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.72■□□□□ 0.59
Slc6a4Q60857 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc6a4Q60857 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Slc6a4Q60857 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.71■□□□□ 0.59
Slc6a4Q60857 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Slc6a4Q60857 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a4Q60857 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a4Q60857 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a4Q60857 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a4Q60857 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Slc6a4Q60857 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Slc6a4Q60857 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a4Q60857 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.71■□□□□ 0.59
Slc6a4Q60857 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a4Q60857 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a4Q60857 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a4Q60857 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a4Q60857 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a4Q60857 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a4Q60857 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a4Q60857 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.7■□□□□ 0.58
Slc6a4Q60857 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Slc6a4Q60857 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a4Q60857 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.7■□□□□ 0.58
Slc6a4Q60857 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a4Q60857 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a4Q60857 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.7■□□□□ 0.58
Slc6a4Q60857 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Slc6a4Q60857 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a4Q60857 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.7■□□□□ 0.58
Slc6a4Q60857 Gm10252-201ENSMUST00000209541 832 ntBASIC18.7■□□□□ 0.58
Slc6a4Q60857 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a4Q60857 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a4Q60857 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a4Q60857 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a4Q60857 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.7■□□□□ 0.58
Slc6a4Q60857 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a4Q60857 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a4Q60857 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a4Q60857 Iqck-206ENSMUST00000208658 2891 ntBASIC18.69■□□□□ 0.58
Slc6a4Q60857 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a4Q60857 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a4Q60857 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a4Q60857 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.69■□□□□ 0.58
Slc6a4Q60857 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.69■□□□□ 0.58
Slc6a4Q60857 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a4Q60857 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.69■□□□□ 0.58
Slc6a4Q60857 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.69■□□□□ 0.58
Slc6a4Q60857 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a4Q60857 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a4Q60857 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a4Q60857 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.69■□□□□ 0.58
Slc6a4Q60857 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a4Q60857 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a4Q60857 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Slc6a4Q60857 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a4Q60857 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Slc6a4Q60857 Gm38285-201ENSMUST00000192928 922 ntBASIC18.68■□□□□ 0.58
Slc6a4Q60857 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.68■□□□□ 0.58
Slc6a4Q60857 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.68■□□□□ 0.58
Slc6a4Q60857 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.68■□□□□ 0.58
Slc6a4Q60857 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a4Q60857 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a4Q60857 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a4Q60857 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a4Q60857 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a4Q60857 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Slc6a4Q60857 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a4Q60857 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.67■□□□□ 0.58
Slc6a4Q60857 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.67■□□□□ 0.58
Slc6a4Q60857 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a4Q60857 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Slc6a4Q60857 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.67■□□□□ 0.58
Slc6a4Q60857 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Slc6a4Q60857 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a4Q60857 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a4Q60857 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a4Q60857 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a4Q60857 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a4Q60857 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a4Q60857 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Slc6a4Q60857 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.67■□□□□ 0.58
Slc6a4Q60857 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a4Q60857 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a4Q60857 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a4Q60857 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.66■□□□□ 0.58
Slc6a4Q60857 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms