Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav3-1Q5R1I8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-1Q5R1I8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-1Q5R1I8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-1Q5R1I8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-1Q5R1I8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.46□□□□□ -0.41
Trav3-1Q5R1I8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-1Q5R1I8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-1Q5R1I8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trav3-1Q5R1I8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3-1Q5R1I8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3-1Q5R1I8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Trav3-1Q5R1I8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav3-1Q5R1I8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3-1Q5R1I8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3-1Q5R1I8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3-1Q5R1I8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3-1Q5R1I8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3-1Q5R1I8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3-1Q5R1I8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3-1Q5R1I8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3-1Q5R1I8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav3-1Q5R1I8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-1Q5R1I8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-1Q5R1I8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-1Q5R1I8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-1Q5R1I8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-1Q5R1I8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-1Q5R1I8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-1Q5R1I8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-1Q5R1I8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-1Q5R1I8 AC124603.1-201ENSMUST00000223843 308 ntBASIC12.45□□□□□ -0.42
Trav3-1Q5R1I8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-1Q5R1I8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-1Q5R1I8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-1Q5R1I8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav3-1Q5R1I8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-1Q5R1I8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-1Q5R1I8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-1Q5R1I8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav3-1Q5R1I8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-1Q5R1I8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-1Q5R1I8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-1Q5R1I8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav3-1Q5R1I8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-1Q5R1I8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-1Q5R1I8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-1Q5R1I8 Gm37136-201ENSMUST00000194368 194 ntBASIC12.44□□□□□ -0.42
Trav3-1Q5R1I8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav3-1Q5R1I8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-1Q5R1I8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-1Q5R1I8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-1Q5R1I8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav3-1Q5R1I8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav3-1Q5R1I8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-1Q5R1I8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-1Q5R1I8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-1Q5R1I8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav3-1Q5R1I8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-1Q5R1I8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-1Q5R1I8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-1Q5R1I8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-1Q5R1I8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trav3-1Q5R1I8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-1Q5R1I8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-1Q5R1I8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-1Q5R1I8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-1Q5R1I8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-1Q5R1I8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-1Q5R1I8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms