Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav8d-1Q5R1H8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav8d-1Q5R1H8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav8d-1Q5R1H8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Trav8d-1Q5R1H8 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.95□□□□□ -0.02
Trav8d-1Q5R1H8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-1Q5R1H8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-1Q5R1H8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-1Q5R1H8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-1Q5R1H8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-1Q5R1H8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-1Q5R1H8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Trav8d-1Q5R1H8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-1Q5R1H8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-1Q5R1H8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-1Q5R1H8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-1Q5R1H8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-1Q5R1H8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-1Q5R1H8 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.95□□□□□ -0.02
Trav8d-1Q5R1H8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-1Q5R1H8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-1Q5R1H8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav8d-1Q5R1H8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
Trav8d-1Q5R1H8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-1Q5R1H8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav8d-1Q5R1H8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-1Q5R1H8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-1Q5R1H8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-1Q5R1H8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-1Q5R1H8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-1Q5R1H8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-1Q5R1H8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.92□□□□□ -0.02
Trav8d-1Q5R1H8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-1Q5R1H8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-1Q5R1H8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-1Q5R1H8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-1Q5R1H8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-1Q5R1H8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Gm43017-201ENSMUST00000198296 752 ntBASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms