Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim80Q3V061 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Trim80Q3V061 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.83■□□□□ 0.6
Trim80Q3V061 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim80Q3V061 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim80Q3V061 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim80Q3V061 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim80Q3V061 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim80Q3V061 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim80Q3V061 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim80Q3V061 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim80Q3V061 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.83■□□□□ 0.6
Trim80Q3V061 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim80Q3V061 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.82■□□□□ 0.6
Trim80Q3V061 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim80Q3V061 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim80Q3V061 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trim80Q3V061 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trim80Q3V061 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim80Q3V061 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim80Q3V061 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim80Q3V061 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim80Q3V061 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim80Q3V061 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim80Q3V061 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.82■□□□□ 0.6
Trim80Q3V061 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim80Q3V061 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.81■□□□□ 0.6
Trim80Q3V061 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim80Q3V061 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trim80Q3V061 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim80Q3V061 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.81■□□□□ 0.6
Trim80Q3V061 Smad6-203ENSMUST00000179458 273 ntBASIC18.81■□□□□ 0.6
Trim80Q3V061 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Trim80Q3V061 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim80Q3V061 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim80Q3V061 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim80Q3V061 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim80Q3V061 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim80Q3V061 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim80Q3V061 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim80Q3V061 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim80Q3V061 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim80Q3V061 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim80Q3V061 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim80Q3V061 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim80Q3V061 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim80Q3V061 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim80Q3V061 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim80Q3V061 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim80Q3V061 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim80Q3V061 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim80Q3V061 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim80Q3V061 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.79■□□□□ 0.6
Trim80Q3V061 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim80Q3V061 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim80Q3V061 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim80Q3V061 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim80Q3V061 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim80Q3V061 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.79■□□□□ 0.6
Trim80Q3V061 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim80Q3V061 Gm37179-201ENSMUST00000194862 823 ntBASIC18.79■□□□□ 0.6
Trim80Q3V061 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trim80Q3V061 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim80Q3V061 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim80Q3V061 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim80Q3V061 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim80Q3V061 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.79■□□□□ 0.6
Trim80Q3V061 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim80Q3V061 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim80Q3V061 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim80Q3V061 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim80Q3V061 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim80Q3V061 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.78■□□□□ 0.6
Trim80Q3V061 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim80Q3V061 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim80Q3V061 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim80Q3V061 Gm40848-201ENSMUST00000221998 324 ntBASIC18.78■□□□□ 0.6
Trim80Q3V061 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim80Q3V061 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim80Q3V061 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim80Q3V061 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim80Q3V061 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trim80Q3V061 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim80Q3V061 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim80Q3V061 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim80Q3V061 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim80Q3V061 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim80Q3V061 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.77■□□□□ 0.6
Trim80Q3V061 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim80Q3V061 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim80Q3V061 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim80Q3V061 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim80Q3V061 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim80Q3V061 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim80Q3V061 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.77■□□□□ 0.6
Trim80Q3V061 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.77■□□□□ 0.6
Trim80Q3V061 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim80Q3V061 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Trim80Q3V061 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim80Q3V061 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms