Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdkl5Q3UTQ8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdkl5Q3UTQ8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.16■□□□□ 0.98
Cdkl5Q3UTQ8 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.15■□□□□ 0.98
Cdkl5Q3UTQ8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdkl5Q3UTQ8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Cdkl5Q3UTQ8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdkl5Q3UTQ8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdkl5Q3UTQ8 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.15■□□□□ 0.98
Cdkl5Q3UTQ8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdkl5Q3UTQ8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cdkl5Q3UTQ8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cdkl5Q3UTQ8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdkl5Q3UTQ8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Cdkl5Q3UTQ8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdkl5Q3UTQ8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.15■□□□□ 0.98
Cdkl5Q3UTQ8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cdkl5Q3UTQ8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cdkl5Q3UTQ8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cdkl5Q3UTQ8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.14■□□□□ 0.98
Cdkl5Q3UTQ8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
Cdkl5Q3UTQ8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Cdkl5Q3UTQ8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cdkl5Q3UTQ8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdkl5Q3UTQ8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdkl5Q3UTQ8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdkl5Q3UTQ8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdkl5Q3UTQ8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Cdkl5Q3UTQ8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cdkl5Q3UTQ8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdkl5Q3UTQ8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdkl5Q3UTQ8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Cdkl5Q3UTQ8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdkl5Q3UTQ8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdkl5Q3UTQ8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdkl5Q3UTQ8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cdkl5Q3UTQ8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Cdkl5Q3UTQ8 Gm6211-202ENSMUST00000167849 925 ntBASIC21.13■□□□□ 0.97
Cdkl5Q3UTQ8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.13■□□□□ 0.97
Cdkl5Q3UTQ8 Gm7291-201ENSMUST00000199147 382 ntBASIC21.13■□□□□ 0.97
Cdkl5Q3UTQ8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cdkl5Q3UTQ8 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.13■□□□□ 0.97
Cdkl5Q3UTQ8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdkl5Q3UTQ8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdkl5Q3UTQ8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cdkl5Q3UTQ8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdkl5Q3UTQ8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cdkl5Q3UTQ8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdkl5Q3UTQ8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdkl5Q3UTQ8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cdkl5Q3UTQ8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdkl5Q3UTQ8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdkl5Q3UTQ8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdkl5Q3UTQ8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cdkl5Q3UTQ8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdkl5Q3UTQ8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdkl5Q3UTQ8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdkl5Q3UTQ8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cdkl5Q3UTQ8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cdkl5Q3UTQ8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdkl5Q3UTQ8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdkl5Q3UTQ8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdkl5Q3UTQ8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.11■□□□□ 0.97
Cdkl5Q3UTQ8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdkl5Q3UTQ8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.11■□□□□ 0.97
Cdkl5Q3UTQ8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cdkl5Q3UTQ8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cdkl5Q3UTQ8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Cdkl5Q3UTQ8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdkl5Q3UTQ8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cdkl5Q3UTQ8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cdkl5Q3UTQ8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Cdkl5Q3UTQ8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdkl5Q3UTQ8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdkl5Q3UTQ8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdkl5Q3UTQ8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdkl5Q3UTQ8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdkl5Q3UTQ8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.1■□□□□ 0.97
Cdkl5Q3UTQ8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdkl5Q3UTQ8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.1■□□□□ 0.97
Cdkl5Q3UTQ8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdkl5Q3UTQ8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Cdkl5Q3UTQ8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdkl5Q3UTQ8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.1■□□□□ 0.97
Cdkl5Q3UTQ8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdkl5Q3UTQ8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cdkl5Q3UTQ8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdkl5Q3UTQ8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Cdkl5Q3UTQ8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdkl5Q3UTQ8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdkl5Q3UTQ8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdkl5Q3UTQ8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdkl5Q3UTQ8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdkl5Q3UTQ8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cdkl5Q3UTQ8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.09■□□□□ 0.97
Cdkl5Q3UTQ8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Cdkl5Q3UTQ8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdkl5Q3UTQ8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdkl5Q3UTQ8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cdkl5Q3UTQ8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms