Protein–RNA interactions for Protein: Q3TQ03

Ciart, Circadian-associated transcriptional repressor, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiartQ3TQ03 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CiartQ3TQ03 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.16■□□□□ 0.34
CiartQ3TQ03 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CiartQ3TQ03 Gm18959-201ENSMUST00000208954 655 ntBASIC17.16■□□□□ 0.34
CiartQ3TQ03 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.16■□□□□ 0.34
CiartQ3TQ03 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CiartQ3TQ03 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CiartQ3TQ03 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CiartQ3TQ03 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CiartQ3TQ03 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiartQ3TQ03 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.15■□□□□ 0.34
CiartQ3TQ03 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CiartQ3TQ03 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CiartQ3TQ03 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CiartQ3TQ03 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CiartQ3TQ03 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CiartQ3TQ03 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiartQ3TQ03 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CiartQ3TQ03 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiartQ3TQ03 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiartQ3TQ03 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiartQ3TQ03 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiartQ3TQ03 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiartQ3TQ03 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CiartQ3TQ03 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiartQ3TQ03 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiartQ3TQ03 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiartQ3TQ03 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CiartQ3TQ03 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CiartQ3TQ03 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.14■□□□□ 0.33
CiartQ3TQ03 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiartQ3TQ03 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CiartQ3TQ03 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiartQ3TQ03 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.14■□□□□ 0.33
CiartQ3TQ03 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiartQ3TQ03 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CiartQ3TQ03 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CiartQ3TQ03 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CiartQ3TQ03 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CiartQ3TQ03 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CiartQ3TQ03 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.13■□□□□ 0.33
CiartQ3TQ03 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.13■□□□□ 0.33
CiartQ3TQ03 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CiartQ3TQ03 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.13■□□□□ 0.33
CiartQ3TQ03 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CiartQ3TQ03 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CiartQ3TQ03 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CiartQ3TQ03 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CiartQ3TQ03 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CiartQ3TQ03 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CiartQ3TQ03 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.12■□□□□ 0.33
CiartQ3TQ03 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CiartQ3TQ03 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CiartQ3TQ03 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.12■□□□□ 0.33
CiartQ3TQ03 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.12■□□□□ 0.33
CiartQ3TQ03 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CiartQ3TQ03 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CiartQ3TQ03 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CiartQ3TQ03 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CiartQ3TQ03 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CiartQ3TQ03 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.12■□□□□ 0.33
CiartQ3TQ03 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CiartQ3TQ03 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CiartQ3TQ03 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CiartQ3TQ03 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CiartQ3TQ03 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CiartQ3TQ03 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CiartQ3TQ03 Gm23634-201ENSMUST00000175071 91 ntBASIC17.11■□□□□ 0.33
CiartQ3TQ03 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CiartQ3TQ03 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CiartQ3TQ03 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CiartQ3TQ03 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.11■□□□□ 0.33
CiartQ3TQ03 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CiartQ3TQ03 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CiartQ3TQ03 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CiartQ3TQ03 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.1■□□□□ 0.33
CiartQ3TQ03 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.1■□□□□ 0.33
CiartQ3TQ03 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CiartQ3TQ03 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CiartQ3TQ03 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CiartQ3TQ03 Gm10013-201ENSMUST00000106074 672 ntBASIC17.1■□□□□ 0.33
CiartQ3TQ03 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CiartQ3TQ03 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CiartQ3TQ03 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.1■□□□□ 0.33
CiartQ3TQ03 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CiartQ3TQ03 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.1■□□□□ 0.33
CiartQ3TQ03 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CiartQ3TQ03 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CiartQ3TQ03 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CiartQ3TQ03 Golph3-202ENSMUST00000226517 2359 ntBASIC17.1■□□□□ 0.33
CiartQ3TQ03 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.1■□□□□ 0.33
CiartQ3TQ03 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CiartQ3TQ03 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CiartQ3TQ03 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.09■□□□□ 0.33
CiartQ3TQ03 Gm27463-201ENSMUST00000183569 57 ntBASIC17.09■□□□□ 0.33
CiartQ3TQ03 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CiartQ3TQ03 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CiartQ3TQ03 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CiartQ3TQ03 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CiartQ3TQ03 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms