Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tff1Q08423 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tff1Q08423 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tff1Q08423 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tff1Q08423 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tff1Q08423 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.16■□□□□ 0.02
Tff1Q08423 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tff1Q08423 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tff1Q08423 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Tff1Q08423 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.16■□□□□ 0.02
Tff1Q08423 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tff1Q08423 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tff1Q08423 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tff1Q08423 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tff1Q08423 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.15■□□□□ 0.02
Tff1Q08423 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tff1Q08423 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tff1Q08423 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tff1Q08423 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tff1Q08423 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tff1Q08423 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.15■□□□□ 0.02
Tff1Q08423 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.15■□□□□ 0.02
Tff1Q08423 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tff1Q08423 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tff1Q08423 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tff1Q08423 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Tff1Q08423 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tff1Q08423 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tff1Q08423 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tff1Q08423 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Tff1Q08423 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tff1Q08423 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tff1Q08423 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tff1Q08423 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Tff1Q08423 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tff1Q08423 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Tff1Q08423 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.14■□□□□ 0.01
Tff1Q08423 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.14■□□□□ 0.01
Tff1Q08423 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tff1Q08423 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tff1Q08423 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tff1Q08423 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tff1Q08423 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tff1Q08423 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tff1Q08423 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tff1Q08423 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Tff1Q08423 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tff1Q08423 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tff1Q08423 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Tff1Q08423 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.13■□□□□ 0.01
Tff1Q08423 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tff1Q08423 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tff1Q08423 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Tff1Q08423 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tff1Q08423 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.13■□□□□ 0.01
Tff1Q08423 Gm27801-201ENSMUST00000184174 223 ntBASIC15.13■□□□□ 0.01
Tff1Q08423 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tff1Q08423 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.13■□□□□ 0.01
Tff1Q08423 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tff1Q08423 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tff1Q08423 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.13■□□□□ 0.01
Tff1Q08423 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tff1Q08423 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tff1Q08423 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tff1Q08423 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tff1Q08423 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tff1Q08423 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tff1Q08423 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Tff1Q08423 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tff1Q08423 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Tff1Q08423 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.12■□□□□ 0.01
Tff1Q08423 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tff1Q08423 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Tff1Q08423 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.12■□□□□ 0.01
Tff1Q08423 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.12■□□□□ 0.01
Tff1Q08423 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.12■□□□□ 0.01
Tff1Q08423 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tff1Q08423 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tff1Q08423 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tff1Q08423 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Tff1Q08423 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tff1Q08423 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tff1Q08423 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Tff1Q08423 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tff1Q08423 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tff1Q08423 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tff1Q08423 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tff1Q08423 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tff1Q08423 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tff1Q08423 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tff1Q08423 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tff1Q08423 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tff1Q08423 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.11■□□□□ 0.01
Tff1Q08423 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.11■□□□□ 0.01
Tff1Q08423 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.11■□□□□ 0.01
Tff1Q08423 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tff1Q08423 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tff1Q08423 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.11■□□□□ 0.01
Tff1Q08423 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tff1Q08423 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms