Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim43cP86449 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43cP86449 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.88■□□□□ 0.77
Trim43cP86449 Tgds-204ENSMUST00000228543 1594 ntBASIC19.88■□□□□ 0.77
Trim43cP86449 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trim43cP86449 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Trim43cP86449 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trim43cP86449 Mir5133-201ENSMUST00000174955 77 ntBASIC19.88■□□□□ 0.77
Trim43cP86449 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim43cP86449 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trim43cP86449 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43cP86449 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43cP86449 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.87■□□□□ 0.77
Trim43cP86449 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43cP86449 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43cP86449 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43cP86449 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43cP86449 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43cP86449 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43cP86449 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Trim43cP86449 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43cP86449 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43cP86449 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43cP86449 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43cP86449 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim43cP86449 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim43cP86449 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim43cP86449 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Trim43cP86449 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim43cP86449 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim43cP86449 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trim43cP86449 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.86■□□□□ 0.77
Trim43cP86449 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.86■□□□□ 0.77
Trim43cP86449 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trim43cP86449 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim43cP86449 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim43cP86449 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim43cP86449 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Trim43cP86449 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim43cP86449 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.85■□□□□ 0.77
Trim43cP86449 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trim43cP86449 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim43cP86449 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim43cP86449 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim43cP86449 Fst-202ENSMUST00000223640 2612 ntBASIC19.85■□□□□ 0.77
Trim43cP86449 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.85■□□□□ 0.77
Trim43cP86449 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trim43cP86449 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim43cP86449 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trim43cP86449 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.85■□□□□ 0.77
Trim43cP86449 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim43cP86449 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.85■□□□□ 0.77
Trim43cP86449 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim43cP86449 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
Trim43cP86449 Grk6-206ENSMUST00000224995 2971 ntBASIC19.85■□□□□ 0.77
Trim43cP86449 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43cP86449 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43cP86449 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim43cP86449 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43cP86449 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43cP86449 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43cP86449 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43cP86449 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trim43cP86449 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim43cP86449 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim43cP86449 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43cP86449 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43cP86449 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43cP86449 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Trim43cP86449 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.83■□□□□ 0.77
Trim43cP86449 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim43cP86449 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim43cP86449 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Trim43cP86449 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim43cP86449 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Trim43cP86449 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Trim43cP86449 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim43cP86449 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim43cP86449 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.83■□□□□ 0.76
Trim43cP86449 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim43cP86449 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim43cP86449 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Trim43cP86449 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43cP86449 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43cP86449 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43cP86449 Rab3c-203ENSMUST00000224180 967 ntBASIC19.82■□□□□ 0.76
Trim43cP86449 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43cP86449 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43cP86449 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43cP86449 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43cP86449 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43cP86449 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43cP86449 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trim43cP86449 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43cP86449 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43cP86449 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43cP86449 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Trim43cP86449 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim43cP86449 Gm44549-201ENSMUST00000208351 577 ntBASIC19.81■□□□□ 0.76
Trim43cP86449 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms