Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdx1P52946 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdx1P52946 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdx1P52946 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.05■□□□□ 0.48
Pdx1P52946 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdx1P52946 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdx1P52946 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdx1P52946 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdx1P52946 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdx1P52946 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.05■□□□□ 0.48
Pdx1P52946 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdx1P52946 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdx1P52946 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.05■□□□□ 0.48
Pdx1P52946 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.05■□□□□ 0.48
Pdx1P52946 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.05■□□□□ 0.48
Pdx1P52946 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdx1P52946 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdx1P52946 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pdx1P52946 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdx1P52946 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdx1P52946 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pdx1P52946 Gm5408-201ENSMUST00000197998 747 ntBASIC18.04■□□□□ 0.48
Pdx1P52946 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.04■□□□□ 0.48
Pdx1P52946 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.04■□□□□ 0.48
Pdx1P52946 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdx1P52946 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdx1P52946 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdx1P52946 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdx1P52946 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdx1P52946 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.03■□□□□ 0.48
Pdx1P52946 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.03■□□□□ 0.48
Pdx1P52946 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pdx1P52946 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pdx1P52946 Rab3c-203ENSMUST00000224180 967 ntBASIC18.03■□□□□ 0.48
Pdx1P52946 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdx1P52946 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdx1P52946 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdx1P52946 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdx1P52946 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdx1P52946 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pdx1P52946 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.02■□□□□ 0.48
Pdx1P52946 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pdx1P52946 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdx1P52946 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pdx1P52946 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pdx1P52946 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pdx1P52946 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pdx1P52946 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdx1P52946 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Pdx1P52946 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pdx1P52946 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pdx1P52946 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdx1P52946 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdx1P52946 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pdx1P52946 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.01■□□□□ 0.47
Pdx1P52946 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.01■□□□□ 0.47
Pdx1P52946 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdx1P52946 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdx1P52946 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdx1P52946 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdx1P52946 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pdx1P52946 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.01■□□□□ 0.47
Pdx1P52946 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdx1P52946 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdx1P52946 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pdx1P52946 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pdx1P52946 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdx1P52946 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18■□□□□ 0.47
Pdx1P52946 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.47
Pdx1P52946 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18■□□□□ 0.47
Pdx1P52946 Gm3807-201ENSMUST00000193520 1168 ntBASIC18■□□□□ 0.47
Pdx1P52946 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Pdx1P52946 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdx1P52946 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdx1P52946 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18■□□□□ 0.47
Pdx1P52946 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pdx1P52946 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdx1P52946 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdx1P52946 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdx1P52946 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdx1P52946 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdx1P52946 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdx1P52946 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdx1P52946 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.99■□□□□ 0.47
Pdx1P52946 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.99■□□□□ 0.47
Pdx1P52946 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdx1P52946 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.99■□□□□ 0.47
Pdx1P52946 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdx1P52946 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.99■□□□□ 0.47
Pdx1P52946 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.99■□□□□ 0.47
Pdx1P52946 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdx1P52946 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdx1P52946 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdx1P52946 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdx1P52946 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdx1P52946 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdx1P52946 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdx1P52946 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pdx1P52946 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pdx1P52946 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms