Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Brca1P48754 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.73■□□□□ 0.91
Brca1P48754 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Brca1P48754 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.73■□□□□ 0.91
Brca1P48754 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Brca1P48754 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Brca1P48754 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Brca1P48754 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Brca1P48754 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Brca1P48754 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Brca1P48754 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Brca1P48754 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.71■□□□□ 0.91
Brca1P48754 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Brca1P48754 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Brca1P48754 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Brca1P48754 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Brca1P48754 Gm14859-201ENSMUST00000117752 357 ntBASIC20.71■□□□□ 0.91
Brca1P48754 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Brca1P48754 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Brca1P48754 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Brca1P48754 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Brca1P48754 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Brca1P48754 Gm7284-201ENSMUST00000131667 944 ntBASIC20.69■□□□□ 0.9
Brca1P48754 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Brca1P48754 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Brca1P48754 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Brca1P48754 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Brca1P48754 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Brca1P48754 Gm18101-201ENSMUST00000215769 548 ntBASIC20.69■□□□□ 0.9
Brca1P48754 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Brca1P48754 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Brca1P48754 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Brca1P48754 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.68■□□□□ 0.9
Brca1P48754 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.68■□□□□ 0.9
Brca1P48754 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Brca1P48754 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Brca1P48754 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Brca1P48754 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Brca1P48754 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Brca1P48754 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
Brca1P48754 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Brca1P48754 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Brca1P48754 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.67■□□□□ 0.9
Brca1P48754 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Brca1P48754 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Brca1P48754 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Brca1P48754 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Brca1P48754 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Brca1P48754 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Brca1P48754 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Brca1P48754 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Brca1P48754 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Brca1P48754 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Brca1P48754 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Brca1P48754 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Brca1P48754 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.66■□□□□ 0.9
Brca1P48754 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.66■□□□□ 0.9
Brca1P48754 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Brca1P48754 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Brca1P48754 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.66■□□□□ 0.9
Brca1P48754 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Brca1P48754 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Brca1P48754 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Brca1P48754 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Brca1P48754 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Brca1P48754 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.66■□□□□ 0.9
Brca1P48754 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brca1P48754 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brca1P48754 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Brca1P48754 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.65■□□□□ 0.9
Brca1P48754 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Brca1P48754 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Brca1P48754 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brca1P48754 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brca1P48754 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brca1P48754 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Brca1P48754 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brca1P48754 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brca1P48754 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Brca1P48754 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Brca1P48754 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Brca1P48754 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Brca1P48754 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brca1P48754 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Brca1P48754 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brca1P48754 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.64■□□□□ 0.89
Brca1P48754 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Brca1P48754 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Brca1P48754 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brca1P48754 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Brca1P48754 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Brca1P48754 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.63■□□□□ 0.89
Brca1P48754 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Brca1P48754 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Brca1P48754 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Brca1P48754 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Brca1P48754 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Brca1P48754 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.63■□□□□ 0.89
Brca1P48754 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Brca1P48754 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms