Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rfx3P48381 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx3P48381 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx3P48381 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx3P48381 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx3P48381 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx3P48381 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx3P48381 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx3P48381 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Rfx3P48381 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx3P48381 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx3P48381 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx3P48381 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rfx3P48381 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.5■□□□□ 0.23
Rfx3P48381 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rfx3P48381 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx3P48381 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx3P48381 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx3P48381 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx3P48381 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx3P48381 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx3P48381 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx3P48381 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Rfx3P48381 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx3P48381 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx3P48381 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx3P48381 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx3P48381 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx3P48381 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Rfx3P48381 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx3P48381 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx3P48381 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rfx3P48381 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfx3P48381 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rfx3P48381 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfx3P48381 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Rfx3P48381 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Rfx3P48381 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.48■□□□□ 0.23
Rfx3P48381 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfx3P48381 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfx3P48381 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfx3P48381 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.48■□□□□ 0.23
Rfx3P48381 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.48■□□□□ 0.23
Rfx3P48381 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfx3P48381 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
Rfx3P48381 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rfx3P48381 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfx3P48381 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfx3P48381 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.48■□□□□ 0.23
Rfx3P48381 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.48■□□□□ 0.23
Rfx3P48381 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfx3P48381 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfx3P48381 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rfx3P48381 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfx3P48381 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfx3P48381 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfx3P48381 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rfx3P48381 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.47■□□□□ 0.23
Rfx3P48381 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfx3P48381 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfx3P48381 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfx3P48381 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rfx3P48381 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfx3P48381 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfx3P48381 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rfx3P48381 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.47■□□□□ 0.23
Rfx3P48381 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfx3P48381 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rfx3P48381 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfx3P48381 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfx3P48381 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfx3P48381 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rfx3P48381 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.46■□□□□ 0.23
Rfx3P48381 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfx3P48381 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfx3P48381 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.46■□□□□ 0.23
Rfx3P48381 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfx3P48381 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfx3P48381 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfx3P48381 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfx3P48381 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rfx3P48381 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rfx3P48381 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx3P48381 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx3P48381 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx3P48381 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx3P48381 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx3P48381 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx3P48381 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx3P48381 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.45■□□□□ 0.22
Rfx3P48381 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.45■□□□□ 0.22
Rfx3P48381 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx3P48381 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.45■□□□□ 0.22
Rfx3P48381 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx3P48381 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.45■□□□□ 0.22
Rfx3P48381 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx3P48381 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx3P48381 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx3P48381 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rfx3P48381 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms