Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps4bP46467 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps4bP46467 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.54■□□□□ 0.56
Vps4bP46467 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vps4bP46467 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps4bP46467 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps4bP46467 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps4bP46467 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps4bP46467 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.54■□□□□ 0.56
Vps4bP46467 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vps4bP46467 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps4bP46467 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps4bP46467 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps4bP46467 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps4bP46467 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.53■□□□□ 0.56
Vps4bP46467 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps4bP46467 Gm13534-201ENSMUST00000121169 513 ntBASIC18.53■□□□□ 0.56
Vps4bP46467 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Vps4bP46467 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.53■□□□□ 0.56
Vps4bP46467 Gm42569-201ENSMUST00000200539 472 ntBASIC18.53■□□□□ 0.56
Vps4bP46467 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps4bP46467 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.53■□□□□ 0.56
Vps4bP46467 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vps4bP46467 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4bP46467 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4bP46467 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4bP46467 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4bP46467 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Vps4bP46467 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4bP46467 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Vps4bP46467 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.52■□□□□ 0.56
Vps4bP46467 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.52■□□□□ 0.56
Vps4bP46467 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4bP46467 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4bP46467 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Vps4bP46467 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4bP46467 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4bP46467 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4bP46467 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vps4bP46467 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Vps4bP46467 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.51■□□□□ 0.55
Vps4bP46467 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps4bP46467 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps4bP46467 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vps4bP46467 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.51■□□□□ 0.55
Vps4bP46467 Gm13234-201ENSMUST00000120010 747 ntBASIC18.51■□□□□ 0.55
Vps4bP46467 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vps4bP46467 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.51■□□□□ 0.55
Vps4bP46467 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps4bP46467 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Vps4bP46467 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps4bP46467 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Vps4bP46467 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Vps4bP46467 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4bP46467 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4bP46467 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.5■□□□□ 0.55
Vps4bP46467 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4bP46467 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4bP46467 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4bP46467 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4bP46467 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Vps4bP46467 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4bP46467 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Vps4bP46467 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.5■□□□□ 0.55
Vps4bP46467 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4bP46467 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.5■□□□□ 0.55
Vps4bP46467 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4bP46467 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4bP46467 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Vps4bP46467 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4bP46467 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4bP46467 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Vps4bP46467 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4bP46467 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4bP46467 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.49■□□□□ 0.55
Vps4bP46467 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4bP46467 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Vps4bP46467 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4bP46467 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4bP46467 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4bP46467 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4bP46467 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4bP46467 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4bP46467 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4bP46467 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4bP46467 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4bP46467 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Vps4bP46467 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Vps4bP46467 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4bP46467 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4bP46467 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4bP46467 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.48■□□□□ 0.55
Vps4bP46467 Gm27405-201ENSMUST00000184201 112 ntBASIC18.48■□□□□ 0.55
Vps4bP46467 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.48■□□□□ 0.55
Vps4bP46467 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.48■□□□□ 0.55
Vps4bP46467 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps4bP46467 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Vps4bP46467 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps4bP46467 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps4bP46467 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 156.4 ms