Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HttP42859 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HttP42859 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HttP42859 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HttP42859 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HttP42859 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HttP42859 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.72■□□□□ 0.75
HttP42859 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.72■□□□□ 0.75
HttP42859 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HttP42859 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HttP42859 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.72■□□□□ 0.75
HttP42859 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HttP42859 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
HttP42859 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HttP42859 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HttP42859 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HttP42859 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HttP42859 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HttP42859 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HttP42859 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HttP42859 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HttP42859 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
HttP42859 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
HttP42859 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
HttP42859 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
HttP42859 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HttP42859 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HttP42859 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
HttP42859 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.7■□□□□ 0.74
HttP42859 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.7■□□□□ 0.74
HttP42859 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HttP42859 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.7■□□□□ 0.74
HttP42859 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.7■□□□□ 0.74
HttP42859 Gm27525-201ENSMUST00000184465 107 ntBASIC19.7■□□□□ 0.74
HttP42859 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
HttP42859 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.69■□□□□ 0.74
HttP42859 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.69■□□□□ 0.74
HttP42859 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HttP42859 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HttP42859 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HttP42859 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HttP42859 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HttP42859 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HttP42859 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HttP42859 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HttP42859 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HttP42859 Gm2274-201ENSMUST00000184539 609 ntBASIC19.68■□□□□ 0.74
HttP42859 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HttP42859 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HttP42859 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HttP42859 Gm21559-201ENSMUST00000220638 855 ntBASIC19.68■□□□□ 0.74
HttP42859 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HttP42859 Gm8587-201ENSMUST00000076538 843 ntBASIC19.68■□□□□ 0.74
HttP42859 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HttP42859 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.68■□□□□ 0.74
HttP42859 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HttP42859 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HttP42859 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.67■□□□□ 0.74
HttP42859 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HttP42859 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HttP42859 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.67■□□□□ 0.74
HttP42859 Gm18958-201ENSMUST00000174258 762 ntBASIC19.67■□□□□ 0.74
HttP42859 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
HttP42859 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HttP42859 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HttP42859 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HttP42859 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.66■□□□□ 0.74
HttP42859 Gm17808-201ENSMUST00000200859 894 ntBASIC19.66■□□□□ 0.74
HttP42859 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
HttP42859 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HttP42859 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HttP42859 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HttP42859 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HttP42859 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HttP42859 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HttP42859 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HttP42859 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HttP42859 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HttP42859 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HttP42859 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HttP42859 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HttP42859 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HttP42859 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.65■□□□□ 0.74
HttP42859 Gm9013-201ENSMUST00000132939 882 ntBASIC19.65■□□□□ 0.74
HttP42859 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HttP42859 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.65■□□□□ 0.74
HttP42859 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HttP42859 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HttP42859 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HttP42859 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
HttP42859 Gm16061-201ENSMUST00000122167 857 ntBASIC19.65■□□□□ 0.74
HttP42859 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HttP42859 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HttP42859 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HttP42859 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HttP42859 Gm38285-201ENSMUST00000192928 922 ntBASIC19.64■□□□□ 0.73
HttP42859 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HttP42859 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HttP42859 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HttP42859 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms