Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a11P31650 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a11P31650 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Slc6a11P31650 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a11P31650 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a11P31650 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a11P31650 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a11P31650 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.3■□□□□ 0.36
Slc6a11P31650 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a11P31650 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.3■□□□□ 0.36
Slc6a11P31650 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.3■□□□□ 0.36
Slc6a11P31650 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a11P31650 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a11P31650 Gm27801-201ENSMUST00000184174 223 ntBASIC17.3■□□□□ 0.36
Slc6a11P31650 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Slc6a11P31650 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.3■□□□□ 0.36
Slc6a11P31650 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Slc6a11P31650 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a11P31650 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a11P31650 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a11P31650 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a11P31650 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a11P31650 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a11P31650 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a11P31650 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Slc6a11P31650 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a11P31650 Nespas-201ENSMUST00000143738 1083 ntBASIC17.29■□□□□ 0.36
Slc6a11P31650 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a11P31650 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Slc6a11P31650 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.29■□□□□ 0.36
Slc6a11P31650 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a11P31650 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.29■□□□□ 0.36
Slc6a11P31650 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a11P31650 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Slc6a11P31650 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a11P31650 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a11P31650 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a11P31650 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a11P31650 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a11P31650 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Slc6a11P31650 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a11P31650 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a11P31650 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a11P31650 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Slc6a11P31650 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a11P31650 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a11P31650 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a11P31650 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a11P31650 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Slc6a11P31650 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a11P31650 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a11P31650 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a11P31650 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a11P31650 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Slc6a11P31650 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.27■□□□□ 0.36
Slc6a11P31650 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a11P31650 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a11P31650 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Slc6a11P31650 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Slc6a11P31650 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc6a11P31650 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.27■□□□□ 0.35
Slc6a11P31650 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Slc6a11P31650 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a11P31650 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Slc6a11P31650 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Slc6a11P31650 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a11P31650 Gm13234-201ENSMUST00000120010 747 ntBASIC17.26■□□□□ 0.35
Slc6a11P31650 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a11P31650 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Slc6a11P31650 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Slc6a11P31650 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a11P31650 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a11P31650 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Slc6a11P31650 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a11P31650 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a11P31650 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a11P31650 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Slc6a11P31650 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.25■□□□□ 0.35
Slc6a11P31650 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a11P31650 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Slc6a11P31650 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a11P31650 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.25■□□□□ 0.35
Slc6a11P31650 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.25■□□□□ 0.35
Slc6a11P31650 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a11P31650 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Slc6a11P31650 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a11P31650 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.25■□□□□ 0.35
Slc6a11P31650 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a11P31650 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.25■□□□□ 0.35
Slc6a11P31650 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a11P31650 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.24■□□□□ 0.35
Slc6a11P31650 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a11P31650 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a11P31650 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a11P31650 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a11P31650 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a11P31650 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a11P31650 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.24■□□□□ 0.35
Slc6a11P31650 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.24■□□□□ 0.35
Slc6a11P31650 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms