Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.54■□□□□ 0.24
Cd40P27512 Gm5408-201ENSMUST00000197998 747 ntBASIC16.54■□□□□ 0.24
Cd40P27512 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.54■□□□□ 0.24
Cd40P27512 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd40P27512 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd40P27512 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd40P27512 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd40P27512 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd40P27512 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cd40P27512 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cd40P27512 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.54■□□□□ 0.24
Cd40P27512 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cd40P27512 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cd40P27512 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd40P27512 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd40P27512 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.53■□□□□ 0.24
Cd40P27512 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd40P27512 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.53■□□□□ 0.24
Cd40P27512 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd40P27512 Gm44549-201ENSMUST00000208351 577 ntBASIC16.53■□□□□ 0.24
Cd40P27512 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd40P27512 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd40P27512 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd40P27512 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.53■□□□□ 0.24
Cd40P27512 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd40P27512 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd40P27512 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd40P27512 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cd40P27512 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cd40P27512 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.53■□□□□ 0.24
Cd40P27512 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cd40P27512 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cd40P27512 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cd40P27512 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cd40P27512 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cd40P27512 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.52■□□□□ 0.24
Cd40P27512 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.52■□□□□ 0.24
Cd40P27512 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.52■□□□□ 0.24
Cd40P27512 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cd40P27512 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cd40P27512 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cd40P27512 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cd40P27512 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.51■□□□□ 0.23
Cd40P27512 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd40P27512 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cd40P27512 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cd40P27512 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd40P27512 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd40P27512 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cd40P27512 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.51■□□□□ 0.23
Cd40P27512 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd40P27512 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd40P27512 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Cd40P27512 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd40P27512 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cd40P27512 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cd40P27512 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd40P27512 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd40P27512 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd40P27512 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd40P27512 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cd40P27512 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd40P27512 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cd40P27512 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd40P27512 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd40P27512 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cd40P27512 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd40P27512 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cd40P27512 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd40P27512 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.5■□□□□ 0.23
Cd40P27512 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd40P27512 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cd40P27512 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd40P27512 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cd40P27512 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.49■□□□□ 0.23
Cd40P27512 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cd40P27512 Gm2399-201ENSMUST00000104944 225 ntBASIC16.49■□□□□ 0.23
Cd40P27512 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Cd40P27512 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.49■□□□□ 0.23
Cd40P27512 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.49■□□□□ 0.23
Cd40P27512 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.49■□□□□ 0.23
Cd40P27512 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd40P27512 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd40P27512 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd40P27512 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd40P27512 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd40P27512 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cd40P27512 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd40P27512 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.49■□□□□ 0.23
Cd40P27512 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cd40P27512 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Cd40P27512 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd40P27512 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cd40P27512 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cd40P27512 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cd40P27512 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd40P27512 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd40P27512 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cd40P27512 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Cd40P27512 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms