Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PtcraP0C6B2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.86■□□□□ 0.13
PtcraP0C6B2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.86■□□□□ 0.13
PtcraP0C6B2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PtcraP0C6B2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PtcraP0C6B2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PtcraP0C6B2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PtcraP0C6B2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
PtcraP0C6B2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PtcraP0C6B2 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.86■□□□□ 0.13
PtcraP0C6B2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PtcraP0C6B2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PtcraP0C6B2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PtcraP0C6B2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PtcraP0C6B2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.86■□□□□ 0.13
PtcraP0C6B2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.86■□□□□ 0.13
PtcraP0C6B2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PtcraP0C6B2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PtcraP0C6B2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PtcraP0C6B2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.85■□□□□ 0.13
PtcraP0C6B2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PtcraP0C6B2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PtcraP0C6B2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PtcraP0C6B2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PtcraP0C6B2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
PtcraP0C6B2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PtcraP0C6B2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PtcraP0C6B2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PtcraP0C6B2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PtcraP0C6B2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
PtcraP0C6B2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PtcraP0C6B2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PtcraP0C6B2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PtcraP0C6B2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PtcraP0C6B2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PtcraP0C6B2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.84■□□□□ 0.13
PtcraP0C6B2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PtcraP0C6B2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PtcraP0C6B2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PtcraP0C6B2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.84■□□□□ 0.13
PtcraP0C6B2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PtcraP0C6B2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PtcraP0C6B2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PtcraP0C6B2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PtcraP0C6B2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PtcraP0C6B2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.83■□□□□ 0.13
PtcraP0C6B2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PtcraP0C6B2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PtcraP0C6B2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PtcraP0C6B2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PtcraP0C6B2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PtcraP0C6B2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PtcraP0C6B2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PtcraP0C6B2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.83■□□□□ 0.12
PtcraP0C6B2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PtcraP0C6B2 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.83■□□□□ 0.12
PtcraP0C6B2 Rab3c-203ENSMUST00000224180 967 ntBASIC15.83■□□□□ 0.12
PtcraP0C6B2 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.83■□□□□ 0.12
PtcraP0C6B2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PtcraP0C6B2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PtcraP0C6B2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PtcraP0C6B2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.83■□□□□ 0.12
PtcraP0C6B2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PtcraP0C6B2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PtcraP0C6B2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PtcraP0C6B2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PtcraP0C6B2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PtcraP0C6B2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PtcraP0C6B2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PtcraP0C6B2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PtcraP0C6B2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PtcraP0C6B2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.82■□□□□ 0.12
PtcraP0C6B2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PtcraP0C6B2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PtcraP0C6B2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PtcraP0C6B2 Gm44549-201ENSMUST00000208351 577 ntBASIC15.82■□□□□ 0.12
PtcraP0C6B2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PtcraP0C6B2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PtcraP0C6B2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PtcraP0C6B2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.82■□□□□ 0.12
PtcraP0C6B2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PtcraP0C6B2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PtcraP0C6B2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PtcraP0C6B2 Tgds-204ENSMUST00000228543 1594 ntBASIC15.82■□□□□ 0.12
PtcraP0C6B2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PtcraP0C6B2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PtcraP0C6B2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PtcraP0C6B2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PtcraP0C6B2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PtcraP0C6B2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PtcraP0C6B2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PtcraP0C6B2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PtcraP0C6B2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
PtcraP0C6B2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PtcraP0C6B2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PtcraP0C6B2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.81■□□□□ 0.12
PtcraP0C6B2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PtcraP0C6B2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PtcraP0C6B2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PtcraP0C6B2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms