Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PdgfrbP05622 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PdgfrbP05622 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
PdgfrbP05622 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PdgfrbP05622 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PdgfrbP05622 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PdgfrbP05622 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PdgfrbP05622 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PdgfrbP05622 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.42■□□□□ 0.54
PdgfrbP05622 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PdgfrbP05622 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PdgfrbP05622 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PdgfrbP05622 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
PdgfrbP05622 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PdgfrbP05622 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
PdgfrbP05622 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PdgfrbP05622 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.42■□□□□ 0.54
PdgfrbP05622 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PdgfrbP05622 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PdgfrbP05622 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PdgfrbP05622 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PdgfrbP05622 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PdgfrbP05622 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PdgfrbP05622 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PdgfrbP05622 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.41■□□□□ 0.54
PdgfrbP05622 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PdgfrbP05622 Gm6211-202ENSMUST00000167849 925 ntBASIC18.41■□□□□ 0.54
PdgfrbP05622 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PdgfrbP05622 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PdgfrbP05622 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PdgfrbP05622 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.41■□□□□ 0.54
PdgfrbP05622 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PdgfrbP05622 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PdgfrbP05622 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.41■□□□□ 0.54
PdgfrbP05622 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PdgfrbP05622 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.41■□□□□ 0.54
PdgfrbP05622 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.4■□□□□ 0.54
PdgfrbP05622 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.4■□□□□ 0.54
PdgfrbP05622 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PdgfrbP05622 Gm7290-201ENSMUST00000104990 617 ntBASIC18.4■□□□□ 0.54
PdgfrbP05622 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PdgfrbP05622 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.4■□□□□ 0.54
PdgfrbP05622 Gm12918-201ENSMUST00000120234 636 ntBASIC18.4■□□□□ 0.54
PdgfrbP05622 Gm15710-201ENSMUST00000121821 636 ntBASIC18.4■□□□□ 0.54
PdgfrbP05622 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PdgfrbP05622 Gm5075-201ENSMUST00000196916 622 ntBASIC18.4■□□□□ 0.54
PdgfrbP05622 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.4■□□□□ 0.54
PdgfrbP05622 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.4■□□□□ 0.54
PdgfrbP05622 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PdgfrbP05622 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.4■□□□□ 0.54
PdgfrbP05622 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.4■□□□□ 0.54
PdgfrbP05622 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.4■□□□□ 0.54
PdgfrbP05622 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.4■□□□□ 0.54
PdgfrbP05622 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PdgfrbP05622 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PdgfrbP05622 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PdgfrbP05622 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PdgfrbP05622 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PdgfrbP05622 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PdgfrbP05622 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PdgfrbP05622 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PdgfrbP05622 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
PdgfrbP05622 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PdgfrbP05622 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.39■□□□□ 0.53
PdgfrbP05622 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PdgfrbP05622 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.39■□□□□ 0.53
PdgfrbP05622 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PdgfrbP05622 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PdgfrbP05622 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PdgfrbP05622 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PdgfrbP05622 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PdgfrbP05622 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PdgfrbP05622 Fst-202ENSMUST00000223640 2612 ntBASIC18.39■□□□□ 0.53
PdgfrbP05622 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PdgfrbP05622 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PdgfrbP05622 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PdgfrbP05622 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PdgfrbP05622 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.38■□□□□ 0.53
PdgfrbP05622 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PdgfrbP05622 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PdgfrbP05622 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.38■□□□□ 0.53
PdgfrbP05622 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PdgfrbP05622 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PdgfrbP05622 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PdgfrbP05622 Gm13148-201ENSMUST00000118892 745 ntBASIC18.38■□□□□ 0.53
PdgfrbP05622 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PdgfrbP05622 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PdgfrbP05622 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PdgfrbP05622 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PdgfrbP05622 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PdgfrbP05622 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PdgfrbP05622 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PdgfrbP05622 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PdgfrbP05622 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PdgfrbP05622 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PdgfrbP05622 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PdgfrbP05622 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PdgfrbP05622 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PdgfrbP05622 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PdgfrbP05622 Mir5133-201ENSMUST00000174955 77 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms