Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PrnpP04925 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PrnpP04925 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PrnpP04925 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PrnpP04925 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PrnpP04925 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PrnpP04925 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PrnpP04925 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.99■□□□□ 0.63
PrnpP04925 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.99■□□□□ 0.63
PrnpP04925 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PrnpP04925 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PrnpP04925 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PrnpP04925 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PrnpP04925 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PrnpP04925 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.99■□□□□ 0.63
PrnpP04925 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PrnpP04925 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PrnpP04925 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PrnpP04925 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PrnpP04925 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
PrnpP04925 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PrnpP04925 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PrnpP04925 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PrnpP04925 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.98■□□□□ 0.63
PrnpP04925 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PrnpP04925 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PrnpP04925 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PrnpP04925 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PrnpP04925 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PrnpP04925 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PrnpP04925 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PrnpP04925 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PrnpP04925 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PrnpP04925 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PrnpP04925 Gm3375-201ENSMUST00000203929 796 ntBASIC18.97■□□□□ 0.63
PrnpP04925 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.97■□□□□ 0.63
PrnpP04925 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PrnpP04925 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PrnpP04925 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PrnpP04925 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PrnpP04925 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PrnpP04925 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PrnpP04925 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PrnpP04925 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PrnpP04925 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.96■□□□□ 0.63
PrnpP04925 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PrnpP04925 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PrnpP04925 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PrnpP04925 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.96■□□□□ 0.63
PrnpP04925 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PrnpP04925 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.96■□□□□ 0.63
PrnpP04925 Gm13559-201ENSMUST00000120476 863 ntBASIC18.96■□□□□ 0.63
PrnpP04925 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
PrnpP04925 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PrnpP04925 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.96■□□□□ 0.63
PrnpP04925 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.96■□□□□ 0.63
PrnpP04925 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PrnpP04925 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PrnpP04925 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.96■□□□□ 0.63
PrnpP04925 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PrnpP04925 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PrnpP04925 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PrnpP04925 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PrnpP04925 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PrnpP04925 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PrnpP04925 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PrnpP04925 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PrnpP04925 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PrnpP04925 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PrnpP04925 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PrnpP04925 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PrnpP04925 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PrnpP04925 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PrnpP04925 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.95■□□□□ 0.62
PrnpP04925 Gm11539-201ENSMUST00000119837 557 ntBASIC18.95■□□□□ 0.62
PrnpP04925 Gm13436-201ENSMUST00000120418 567 ntBASIC18.95■□□□□ 0.62
PrnpP04925 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.95■□□□□ 0.62
PrnpP04925 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PrnpP04925 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.95■□□□□ 0.62
PrnpP04925 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PrnpP04925 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PrnpP04925 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PrnpP04925 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.94■□□□□ 0.62
PrnpP04925 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PrnpP04925 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PrnpP04925 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PrnpP04925 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PrnpP04925 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PrnpP04925 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PrnpP04925 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PrnpP04925 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.93■□□□□ 0.62
PrnpP04925 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PrnpP04925 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
PrnpP04925 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PrnpP04925 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PrnpP04925 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PrnpP04925 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
PrnpP04925 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PrnpP04925 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.93■□□□□ 0.62
PrnpP04925 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms