Protein–RNA interactions for Protein: P04235

Cd3d, T-cell surface glycoprotein CD3 delta chain, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd3dP04235 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cd3dP04235 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cd3dP04235 Gm38285-201ENSMUST00000192928 922 ntBASIC21.3■■□□□ 1
Cd3dP04235 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Cd3dP04235 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cd3dP04235 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cd3dP04235 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Cd3dP04235 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Cd3dP04235 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cd3dP04235 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Cd3dP04235 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cd3dP04235 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cd3dP04235 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Cd3dP04235 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cd3dP04235 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cd3dP04235 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cd3dP04235 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cd3dP04235 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cd3dP04235 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cd3dP04235 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cd3dP04235 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Cd3dP04235 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Cd3dP04235 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cd3dP04235 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cd3dP04235 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cd3dP04235 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cd3dP04235 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cd3dP04235 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cd3dP04235 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.28■■□□□ 1
Cd3dP04235 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cd3dP04235 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cd3dP04235 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Cd3dP04235 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cd3dP04235 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cd3dP04235 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cd3dP04235 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cd3dP04235 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cd3dP04235 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
Cd3dP04235 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cd3dP04235 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cd3dP04235 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cd3dP04235 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.27■■□□□ 1
Cd3dP04235 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.27■■□□□ 1
Cd3dP04235 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cd3dP04235 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cd3dP04235 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.27■□□□□ 0.99
Cd3dP04235 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cd3dP04235 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Cd3dP04235 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cd3dP04235 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cd3dP04235 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Cd3dP04235 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cd3dP04235 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cd3dP04235 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cd3dP04235 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cd3dP04235 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cd3dP04235 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.26■□□□□ 0.99
Cd3dP04235 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cd3dP04235 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cd3dP04235 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cd3dP04235 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cd3dP04235 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cd3dP04235 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cd3dP04235 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cd3dP04235 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.25■□□□□ 0.99
Cd3dP04235 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cd3dP04235 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Cd3dP04235 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.25■□□□□ 0.99
Cd3dP04235 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cd3dP04235 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cd3dP04235 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cd3dP04235 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cd3dP04235 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cd3dP04235 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cd3dP04235 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cd3dP04235 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cd3dP04235 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cd3dP04235 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.24■□□□□ 0.99
Cd3dP04235 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cd3dP04235 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cd3dP04235 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cd3dP04235 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cd3dP04235 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.23■□□□□ 0.99
Cd3dP04235 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cd3dP04235 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cd3dP04235 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Cd3dP04235 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cd3dP04235 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cd3dP04235 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.23■□□□□ 0.99
Cd3dP04235 Mtag2-201ENSMUST00000058665 714 ntBASIC21.23■□□□□ 0.99
Cd3dP04235 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cd3dP04235 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cd3dP04235 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cd3dP04235 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.23■□□□□ 0.99
Cd3dP04235 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cd3dP04235 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cd3dP04235 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cd3dP04235 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cd3dP04235 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cd3dP04235 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms