Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CfdP03953 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CfdP03953 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CfdP03953 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CfdP03953 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CfdP03953 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CfdP03953 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CfdP03953 Tgds-204ENSMUST00000228543 1594 ntBASIC15.24■□□□□ 0.03
CfdP03953 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CfdP03953 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CfdP03953 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CfdP03953 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CfdP03953 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CfdP03953 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CfdP03953 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CfdP03953 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CfdP03953 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CfdP03953 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CfdP03953 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CfdP03953 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.24■□□□□ 0.03
CfdP03953 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CfdP03953 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CfdP03953 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CfdP03953 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CfdP03953 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CfdP03953 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CfdP03953 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CfdP03953 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.23■□□□□ 0.03
CfdP03953 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.23■□□□□ 0.03
CfdP03953 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.23■□□□□ 0.03
CfdP03953 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.23■□□□□ 0.03
CfdP03953 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CfdP03953 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CfdP03953 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CfdP03953 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CfdP03953 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CfdP03953 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.23■□□□□ 0.03
CfdP03953 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CfdP03953 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CfdP03953 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CfdP03953 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CfdP03953 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CfdP03953 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CfdP03953 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CfdP03953 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CfdP03953 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CfdP03953 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CfdP03953 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CfdP03953 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CfdP03953 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CfdP03953 Gm9959-201ENSMUST00000068277 390 ntBASIC15.22■□□□□ 0.03
CfdP03953 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.22■□□□□ 0.03
CfdP03953 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CfdP03953 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CfdP03953 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CfdP03953 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CfdP03953 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CfdP03953 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CfdP03953 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CfdP03953 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CfdP03953 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CfdP03953 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.21■□□□□ 0.03
CfdP03953 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CfdP03953 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CfdP03953 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CfdP03953 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CfdP03953 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
CfdP03953 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CfdP03953 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CfdP03953 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CfdP03953 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CfdP03953 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
CfdP03953 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.21■□□□□ 0.02
CfdP03953 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.21■□□□□ 0.02
CfdP03953 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
CfdP03953 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CfdP03953 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
CfdP03953 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CfdP03953 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CfdP03953 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CfdP03953 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CfdP03953 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CfdP03953 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.2■□□□□ 0.02
CfdP03953 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CfdP03953 Spcs1-204ENSMUST00000226782 949 ntBASIC15.2■□□□□ 0.02
CfdP03953 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.2■□□□□ 0.02
CfdP03953 Golgb1-201ENSMUST00000023534 498 ntBASIC15.2■□□□□ 0.02
CfdP03953 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CfdP03953 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CfdP03953 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CfdP03953 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.2■□□□□ 0.02
CfdP03953 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CfdP03953 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CfdP03953 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CfdP03953 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CfdP03953 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CfdP03953 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CfdP03953 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CfdP03953 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CfdP03953 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms