Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ShdO88834 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
ShdO88834 Gm6211-202ENSMUST00000167849 925 ntBASIC18.65■□□□□ 0.58
ShdO88834 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ShdO88834 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
ShdO88834 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.65■□□□□ 0.58
ShdO88834 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ShdO88834 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ShdO88834 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.65■□□□□ 0.58
ShdO88834 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.65■□□□□ 0.58
ShdO88834 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.64■□□□□ 0.58
ShdO88834 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ShdO88834 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ShdO88834 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ShdO88834 Gm13148-201ENSMUST00000118892 745 ntBASIC18.64■□□□□ 0.57
ShdO88834 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ShdO88834 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ShdO88834 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ShdO88834 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ShdO88834 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ShdO88834 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ShdO88834 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ShdO88834 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ShdO88834 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ShdO88834 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ShdO88834 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ShdO88834 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ShdO88834 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.63■□□□□ 0.57
ShdO88834 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ShdO88834 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ShdO88834 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ShdO88834 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ShdO88834 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ShdO88834 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ShdO88834 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ShdO88834 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ShdO88834 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ShdO88834 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ShdO88834 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ShdO88834 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ShdO88834 Gm12933-201ENSMUST00000120203 872 ntBASIC18.62■□□□□ 0.57
ShdO88834 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ShdO88834 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ShdO88834 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ShdO88834 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.62■□□□□ 0.57
ShdO88834 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ShdO88834 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ShdO88834 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ShdO88834 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ShdO88834 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ShdO88834 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.62■□□□□ 0.57
ShdO88834 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ShdO88834 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ShdO88834 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ShdO88834 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ShdO88834 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.61■□□□□ 0.57
ShdO88834 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ShdO88834 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.61■□□□□ 0.57
ShdO88834 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ShdO88834 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.61■□□□□ 0.57
ShdO88834 Gm10602-201ENSMUST00000098239 609 ntBASIC18.61■□□□□ 0.57
ShdO88834 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ShdO88834 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ShdO88834 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShdO88834 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShdO88834 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.6■□□□□ 0.57
ShdO88834 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShdO88834 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShdO88834 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShdO88834 Gm7290-201ENSMUST00000104990 617 ntBASIC18.6■□□□□ 0.57
ShdO88834 Gm12918-201ENSMUST00000120234 636 ntBASIC18.6■□□□□ 0.57
ShdO88834 Gm15710-201ENSMUST00000121821 636 ntBASIC18.6■□□□□ 0.57
ShdO88834 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShdO88834 Gm5075-201ENSMUST00000196916 622 ntBASIC18.6■□□□□ 0.57
ShdO88834 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShdO88834 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShdO88834 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShdO88834 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShdO88834 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.6■□□□□ 0.57
ShdO88834 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.6■□□□□ 0.57
ShdO88834 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShdO88834 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ShdO88834 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ShdO88834 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShdO88834 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShdO88834 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShdO88834 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShdO88834 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShdO88834 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShdO88834 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShdO88834 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShdO88834 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
ShdO88834 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShdO88834 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShdO88834 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShdO88834 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShdO88834 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShdO88834 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
ShdO88834 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ShdO88834 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms