Protein–RNA interactions for Protein: O70309

Itgb5, Integrin beta-5, mousemouse

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb5O70309 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.31■□□□□ 0.84
Itgb5O70309 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Itgb5O70309 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.31■□□□□ 0.84
Itgb5O70309 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Itgb5O70309 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Itgb5O70309 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Itgb5O70309 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Itgb5O70309 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Itgb5O70309 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Itgb5O70309 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.3■□□□□ 0.84
Itgb5O70309 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Itgb5O70309 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Itgb5O70309 Gm6576-201ENSMUST00000169678 883 ntBASIC20.3■□□□□ 0.84
Itgb5O70309 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Itgb5O70309 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Itgb5O70309 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Itgb5O70309 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Itgb5O70309 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Itgb5O70309 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Itgb5O70309 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.3■□□□□ 0.84
Itgb5O70309 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Itgb5O70309 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Itgb5O70309 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Itgb5O70309 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Itgb5O70309 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Itgb5O70309 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Itgb5O70309 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Itgb5O70309 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Itgb5O70309 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Itgb5O70309 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Itgb5O70309 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Itgb5O70309 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Itgb5O70309 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.29■□□□□ 0.84
Itgb5O70309 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Itgb5O70309 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Itgb5O70309 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itgb5O70309 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itgb5O70309 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.28■□□□□ 0.84
Itgb5O70309 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.28■□□□□ 0.84
Itgb5O70309 Gm15375-201ENSMUST00000119510 849 ntBASIC20.28■□□□□ 0.84
Itgb5O70309 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itgb5O70309 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.28■□□□□ 0.84
Itgb5O70309 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itgb5O70309 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Itgb5O70309 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itgb5O70309 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.28■□□□□ 0.84
Itgb5O70309 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.28■□□□□ 0.84
Itgb5O70309 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itgb5O70309 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itgb5O70309 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itgb5O70309 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itgb5O70309 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.27■□□□□ 0.84
Itgb5O70309 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.27■□□□□ 0.84
Itgb5O70309 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.27■□□□□ 0.84
Itgb5O70309 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Itgb5O70309 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.27■□□□□ 0.84
Itgb5O70309 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Itgb5O70309 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Itgb5O70309 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.26■□□□□ 0.83
Itgb5O70309 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Itgb5O70309 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.26■□□□□ 0.83
Itgb5O70309 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Itgb5O70309 Mir1199-201ENSMUST00000117015 119 ntBASIC20.26■□□□□ 0.83
Itgb5O70309 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.26■□□□□ 0.83
Itgb5O70309 Mir6982-201ENSMUST00000184354 68 ntBASIC20.26■□□□□ 0.83
Itgb5O70309 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Itgb5O70309 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Itgb5O70309 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Itgb5O70309 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Itgb5O70309 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Itgb5O70309 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.25■□□□□ 0.83
Itgb5O70309 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Itgb5O70309 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Itgb5O70309 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.25■□□□□ 0.83
Itgb5O70309 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.25■□□□□ 0.83
Itgb5O70309 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.25■□□□□ 0.83
Itgb5O70309 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Itgb5O70309 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Itgb5O70309 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Itgb5O70309 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Itgb5O70309 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.25■□□□□ 0.83
Itgb5O70309 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Itgb5O70309 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Itgb5O70309 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Itgb5O70309 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Itgb5O70309 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Itgb5O70309 Gm715-201ENSMUST00000117865 831 ntBASIC20.24■□□□□ 0.83
Itgb5O70309 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Itgb5O70309 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Itgb5O70309 Gm42545-201ENSMUST00000202755 922 ntBASIC20.24■□□□□ 0.83
Itgb5O70309 Gm18025-201ENSMUST00000221733 862 ntBASIC20.24■□□□□ 0.83
Itgb5O70309 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.24■□□□□ 0.83
Itgb5O70309 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Itgb5O70309 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.24■□□□□ 0.83
Itgb5O70309 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Itgb5O70309 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Itgb5O70309 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Itgb5O70309 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Itgb5O70309 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Itgb5O70309 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms