Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Tgds-204ENSMUST00000228543 1594 ntBASIC22.35■■□□□ 1.17
Mmp8O70138 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Mmp8O70138 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Mmp8O70138 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Mmp8O70138 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
Mmp8O70138 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Mmp8O70138 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Mmp8O70138 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Mmp8O70138 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Mmp8O70138 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Mmp8O70138 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Mmp8O70138 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC22.34■■□□□ 1.17
Mmp8O70138 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Mmp8O70138 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Mmp8O70138 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Mmp8O70138 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Mmp8O70138 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Mmp8O70138 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Mmp8O70138 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Mmp8O70138 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC22.33■■□□□ 1.17
Mmp8O70138 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Mmp8O70138 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Mmp8O70138 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Mmp8O70138 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Mmp8O70138 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Mmp8O70138 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
Mmp8O70138 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Mmp8O70138 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Mmp8O70138 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Mmp8O70138 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Mmp8O70138 Gm44544-201ENSMUST00000207052 1844 ntBASIC22.32■■□□□ 1.16
Mmp8O70138 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC22.32■■□□□ 1.16
Mmp8O70138 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC22.32■■□□□ 1.16
Mmp8O70138 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Mmp8O70138 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Mmp8O70138 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Mmp8O70138 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Mmp8O70138 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Mmp8O70138 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Mmp8O70138 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Mmp8O70138 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Mmp8O70138 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Mmp8O70138 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Mmp8O70138 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Mmp8O70138 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Mmp8O70138 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Mmp8O70138 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC22.31■■□□□ 1.16
Mmp8O70138 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Mmp8O70138 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Mmp8O70138 Gm5953-201ENSMUST00000220644 2616 ntBASIC22.3■■□□□ 1.16
Mmp8O70138 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC22.3■■□□□ 1.16
Mmp8O70138 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Mmp8O70138 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Mmp8O70138 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Mmp8O70138 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Mmp8O70138 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Mmp8O70138 Gm12527-201ENSMUST00000117967 564 ntBASIC22.3■■□□□ 1.16
Mmp8O70138 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC22.3■■□□□ 1.16
Mmp8O70138 Gm20049-201ENSMUST00000219950 730 ntBASIC22.3■■□□□ 1.16
Mmp8O70138 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Mmp8O70138 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC22.3■■□□□ 1.16
Mmp8O70138 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Mmp8O70138 Dio3-201ENSMUST00000097228 1449 ntBASIC22.3■■□□□ 1.16
Mmp8O70138 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Mmp8O70138 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Mmp8O70138 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Mmp8O70138 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Mmp8O70138 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Mmp8O70138 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Mmp8O70138 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Mmp8O70138 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Mmp8O70138 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Mmp8O70138 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Mmp8O70138 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Mmp8O70138 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Mmp8O70138 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Mmp8O70138 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Mmp8O70138 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Mmp8O70138 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC22.28■■□□□ 1.16
Mmp8O70138 Gm2559-201ENSMUST00000201323 363 ntBASIC22.28■■□□□ 1.16
Mmp8O70138 Zfp783-201ENSMUST00000095946 670 ntBASIC22.28■■□□□ 1.16
Mmp8O70138 Fst-202ENSMUST00000223640 2612 ntBASIC22.28■■□□□ 1.16
Mmp8O70138 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC22.28■■□□□ 1.16
Mmp8O70138 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Mmp8O70138 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Mmp8O70138 Gm38285-201ENSMUST00000192928 922 ntBASIC22.27■■□□□ 1.16
Mmp8O70138 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Mmp8O70138 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Mmp8O70138 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Mmp8O70138 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Mmp8O70138 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Mmp8O70138 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Mmp8O70138 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Mmp8O70138 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Mmp8O70138 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Mmp8O70138 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Mmp8O70138 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Mmp8O70138 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC22.26■■□□□ 1.15
Mmp8O70138 Gm12896-201ENSMUST00000118430 226 ntBASIC22.26■■□□□ 1.15
Mmp8O70138 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms