Protein–RNA interactions for Protein: O35906

Spib, Transcription factor Spi-B, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpibO35906 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.24■□□□□ 0.83
SpibO35906 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.24■□□□□ 0.83
SpibO35906 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SpibO35906 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SpibO35906 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SpibO35906 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SpibO35906 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SpibO35906 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SpibO35906 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SpibO35906 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
SpibO35906 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SpibO35906 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
SpibO35906 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.23■□□□□ 0.83
SpibO35906 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SpibO35906 Mir2861-201ENSMUST00000175539 82 ntBASIC20.23■□□□□ 0.83
SpibO35906 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.23■□□□□ 0.83
SpibO35906 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.23■□□□□ 0.83
SpibO35906 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.23■□□□□ 0.83
SpibO35906 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SpibO35906 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SpibO35906 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
SpibO35906 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.22■□□□□ 0.83
SpibO35906 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SpibO35906 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SpibO35906 Gm12382-201ENSMUST00000122005 922 ntBASIC20.22■□□□□ 0.83
SpibO35906 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.22■□□□□ 0.83
SpibO35906 Gm3375-201ENSMUST00000203929 796 ntBASIC20.22■□□□□ 0.83
SpibO35906 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.22■□□□□ 0.83
SpibO35906 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.22■□□□□ 0.83
SpibO35906 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SpibO35906 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SpibO35906 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SpibO35906 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SpibO35906 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SpibO35906 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SpibO35906 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SpibO35906 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.21■□□□□ 0.83
SpibO35906 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SpibO35906 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SpibO35906 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SpibO35906 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SpibO35906 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SpibO35906 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.21■□□□□ 0.83
SpibO35906 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SpibO35906 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SpibO35906 Gm30025-201ENSMUST00000218555 728 ntBASIC20.21■□□□□ 0.83
SpibO35906 Odf3b-204ENSMUST00000227834 930 ntBASIC20.21■□□□□ 0.83
SpibO35906 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
SpibO35906 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SpibO35906 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.83
SpibO35906 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SpibO35906 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SpibO35906 BC021767-201ENSMUST00000126387 1716 ntBASIC20.2■□□□□ 0.82
SpibO35906 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SpibO35906 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.2■□□□□ 0.82
SpibO35906 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.2■□□□□ 0.82
SpibO35906 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SpibO35906 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SpibO35906 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SpibO35906 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
SpibO35906 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SpibO35906 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SpibO35906 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SpibO35906 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SpibO35906 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SpibO35906 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SpibO35906 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SpibO35906 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SpibO35906 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.19■□□□□ 0.82
SpibO35906 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.19■□□□□ 0.82
SpibO35906 Gm11539-201ENSMUST00000119837 557 ntBASIC20.19■□□□□ 0.82
SpibO35906 Gm13436-201ENSMUST00000120418 567 ntBASIC20.19■□□□□ 0.82
SpibO35906 Gm13559-201ENSMUST00000120476 863 ntBASIC20.19■□□□□ 0.82
SpibO35906 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SpibO35906 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SpibO35906 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SpibO35906 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SpibO35906 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SpibO35906 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SpibO35906 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SpibO35906 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SpibO35906 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SpibO35906 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
SpibO35906 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SpibO35906 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SpibO35906 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SpibO35906 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.18■□□□□ 0.82
SpibO35906 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SpibO35906 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.18■□□□□ 0.82
SpibO35906 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
SpibO35906 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SpibO35906 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SpibO35906 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SpibO35906 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SpibO35906 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SpibO35906 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SpibO35906 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SpibO35906 Timm23-208ENSMUST00000226683 750 ntBASIC20.17■□□□□ 0.82
SpibO35906 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SpibO35906 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms