Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1bO08603 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1bO08603 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.16■□□□□ 0.18
Raet1bO08603 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Raet1bO08603 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1bO08603 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1bO08603 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1bO08603 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.16■□□□□ 0.18
Raet1bO08603 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1bO08603 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1bO08603 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.16■□□□□ 0.18
Raet1bO08603 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Raet1bO08603 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1bO08603 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1bO08603 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1bO08603 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1bO08603 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1bO08603 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Raet1bO08603 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1bO08603 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Raet1bO08603 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.15■□□□□ 0.18
Raet1bO08603 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raet1bO08603 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raet1bO08603 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raet1bO08603 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Raet1bO08603 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.15■□□□□ 0.18
Raet1bO08603 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.15■□□□□ 0.18
Raet1bO08603 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.15■□□□□ 0.18
Raet1bO08603 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.15■□□□□ 0.18
Raet1bO08603 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raet1bO08603 Gm6365-201ENSMUST00000054711 744 ntBASIC16.15■□□□□ 0.18
Raet1bO08603 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Raet1bO08603 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Raet1bO08603 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Raet1bO08603 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1bO08603 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Raet1bO08603 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1bO08603 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.14■□□□□ 0.17
Raet1bO08603 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1bO08603 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1bO08603 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Raet1bO08603 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1bO08603 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1bO08603 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1bO08603 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1bO08603 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1bO08603 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.13■□□□□ 0.17
Raet1bO08603 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1bO08603 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1bO08603 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1bO08603 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1bO08603 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.13■□□□□ 0.17
Raet1bO08603 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1bO08603 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1bO08603 Gm22325-201ENSMUST00000158904 308 ntBASIC16.13■□□□□ 0.17
Raet1bO08603 Gm27405-201ENSMUST00000184201 112 ntBASIC16.13■□□□□ 0.17
Raet1bO08603 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.13■□□□□ 0.17
Raet1bO08603 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.13■□□□□ 0.17
Raet1bO08603 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1bO08603 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1bO08603 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1bO08603 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1bO08603 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1bO08603 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1bO08603 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1bO08603 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Raet1bO08603 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1bO08603 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1bO08603 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1bO08603 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1bO08603 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.12■□□□□ 0.17
Raet1bO08603 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1bO08603 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Raet1bO08603 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Raet1bO08603 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1bO08603 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1bO08603 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1bO08603 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1bO08603 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1bO08603 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1bO08603 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Raet1bO08603 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1bO08603 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.12■□□□□ 0.17
Raet1bO08603 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1bO08603 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1bO08603 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1bO08603 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1bO08603 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1bO08603 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Raet1bO08603 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1bO08603 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.12■□□□□ 0.17
Raet1bO08603 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1bO08603 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1bO08603 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Raet1bO08603 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.11■□□□□ 0.17
Raet1bO08603 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1bO08603 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1bO08603 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1bO08603 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.11■□□□□ 0.17
Raet1bO08603 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms