Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
Pcdhb9E9Q5G2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb9E9Q5G2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb9E9Q5G2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb9E9Q5G2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb9E9Q5G2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb9E9Q5G2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcdhb9E9Q5G2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcdhb9E9Q5G2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb9E9Q5G2 Gm13168-201ENSMUST00000121771 632 ntBASIC21.54■■□□□ 1.04
Pcdhb9E9Q5G2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Pcdhb9E9Q5G2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Pcdhb9E9Q5G2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.54■■□□□ 1.04
Pcdhb9E9Q5G2 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.54■■□□□ 1.04
Pcdhb9E9Q5G2 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.54■■□□□ 1.04
Pcdhb9E9Q5G2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb9E9Q5G2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb9E9Q5G2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb9E9Q5G2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Pcdhb9E9Q5G2 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.53■■□□□ 1.04
Pcdhb9E9Q5G2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb9E9Q5G2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb9E9Q5G2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb9E9Q5G2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhb9E9Q5G2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb9E9Q5G2 Gm5643-201ENSMUST00000117081 966 ntBASIC21.53■■□□□ 1.04
Pcdhb9E9Q5G2 Gm8520-201ENSMUST00000186517 868 ntBASIC21.53■■□□□ 1.04
Pcdhb9E9Q5G2 Mtag2-201ENSMUST00000058665 714 ntBASIC21.53■■□□□ 1.04
Pcdhb9E9Q5G2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhb9E9Q5G2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb9E9Q5G2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Pcdhb9E9Q5G2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.52■■□□□ 1.04
Pcdhb9E9Q5G2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb9E9Q5G2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Pcdhb9E9Q5G2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb9E9Q5G2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb9E9Q5G2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb9E9Q5G2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb9E9Q5G2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb9E9Q5G2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Pcdhb9E9Q5G2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb9E9Q5G2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb9E9Q5G2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb9E9Q5G2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb9E9Q5G2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb9E9Q5G2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.52■■□□□ 1.03
Pcdhb9E9Q5G2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Pcdhb9E9Q5G2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdhb9E9Q5G2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdhb9E9Q5G2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb9E9Q5G2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb9E9Q5G2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb9E9Q5G2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb9E9Q5G2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb9E9Q5G2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb9E9Q5G2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb9E9Q5G2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb9E9Q5G2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Pcdhb9E9Q5G2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb9E9Q5G2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.5■■□□□ 1.03
Pcdhb9E9Q5G2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb9E9Q5G2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb9E9Q5G2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.5■■□□□ 1.03
Pcdhb9E9Q5G2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb9E9Q5G2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb9E9Q5G2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Pcdhb9E9Q5G2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb9E9Q5G2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb9E9Q5G2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb9E9Q5G2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb9E9Q5G2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb9E9Q5G2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb9E9Q5G2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb9E9Q5G2 Gm22240-201ENSMUST00000175225 82 ntBASIC21.49■■□□□ 1.03
Pcdhb9E9Q5G2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb9E9Q5G2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb9E9Q5G2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb9E9Q5G2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdhb9E9Q5G2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb9E9Q5G2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb9E9Q5G2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Pcdhb9E9Q5G2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb9E9Q5G2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb9E9Q5G2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb9E9Q5G2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb9E9Q5G2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdhb9E9Q5G2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb9E9Q5G2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Pcdhb9E9Q5G2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb9E9Q5G2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb9E9Q5G2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb9E9Q5G2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb9E9Q5G2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb9E9Q5G2 Gm13158-201ENSMUST00000122007 736 ntBASIC21.47■■□□□ 1.03
Pcdhb9E9Q5G2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.47■■□□□ 1.03
Pcdhb9E9Q5G2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb9E9Q5G2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb9E9Q5G2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb9E9Q5G2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb9E9Q5G2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms