Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clca3bE9PUL3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clca3bE9PUL3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clca3bE9PUL3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clca3bE9PUL3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Clca3bE9PUL3 Gm38285-201ENSMUST00000192928 922 ntBASIC19.7■□□□□ 0.74
Clca3bE9PUL3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clca3bE9PUL3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.7■□□□□ 0.74
Clca3bE9PUL3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Clca3bE9PUL3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Clca3bE9PUL3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Clca3bE9PUL3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clca3bE9PUL3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clca3bE9PUL3 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.69■□□□□ 0.74
Clca3bE9PUL3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clca3bE9PUL3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Clca3bE9PUL3 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.69■□□□□ 0.74
Clca3bE9PUL3 Gm5643-201ENSMUST00000117081 966 ntBASIC19.69■□□□□ 0.74
Clca3bE9PUL3 Gm13168-201ENSMUST00000121771 632 ntBASIC19.69■□□□□ 0.74
Clca3bE9PUL3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.69■□□□□ 0.74
Clca3bE9PUL3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clca3bE9PUL3 Mtag2-201ENSMUST00000058665 714 ntBASIC19.69■□□□□ 0.74
Clca3bE9PUL3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clca3bE9PUL3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clca3bE9PUL3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clca3bE9PUL3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clca3bE9PUL3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clca3bE9PUL3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clca3bE9PUL3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clca3bE9PUL3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clca3bE9PUL3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clca3bE9PUL3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clca3bE9PUL3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clca3bE9PUL3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clca3bE9PUL3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Clca3bE9PUL3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clca3bE9PUL3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.68■□□□□ 0.74
Clca3bE9PUL3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clca3bE9PUL3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Clca3bE9PUL3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clca3bE9PUL3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clca3bE9PUL3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clca3bE9PUL3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clca3bE9PUL3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clca3bE9PUL3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Clca3bE9PUL3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clca3bE9PUL3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.67■□□□□ 0.74
Clca3bE9PUL3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clca3bE9PUL3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clca3bE9PUL3 Gm8520-201ENSMUST00000186517 868 ntBASIC19.67■□□□□ 0.74
Clca3bE9PUL3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Clca3bE9PUL3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clca3bE9PUL3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.67■□□□□ 0.74
Clca3bE9PUL3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clca3bE9PUL3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clca3bE9PUL3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clca3bE9PUL3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clca3bE9PUL3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clca3bE9PUL3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clca3bE9PUL3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clca3bE9PUL3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clca3bE9PUL3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clca3bE9PUL3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clca3bE9PUL3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Clca3bE9PUL3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clca3bE9PUL3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clca3bE9PUL3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clca3bE9PUL3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clca3bE9PUL3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Clca3bE9PUL3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.65■□□□□ 0.74
Clca3bE9PUL3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clca3bE9PUL3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clca3bE9PUL3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clca3bE9PUL3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clca3bE9PUL3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clca3bE9PUL3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clca3bE9PUL3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clca3bE9PUL3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clca3bE9PUL3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Clca3bE9PUL3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clca3bE9PUL3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Clca3bE9PUL3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Clca3bE9PUL3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clca3bE9PUL3 Gm22240-201ENSMUST00000175225 82 ntBASIC19.64■□□□□ 0.73
Clca3bE9PUL3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.64■□□□□ 0.73
Clca3bE9PUL3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clca3bE9PUL3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clca3bE9PUL3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clca3bE9PUL3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clca3bE9PUL3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clca3bE9PUL3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.63■□□□□ 0.73
Clca3bE9PUL3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clca3bE9PUL3 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.63■□□□□ 0.73
Clca3bE9PUL3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clca3bE9PUL3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clca3bE9PUL3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clca3bE9PUL3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clca3bE9PUL3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clca3bE9PUL3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clca3bE9PUL3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms