Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syce3B5KM66 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Syce3B5KM66 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.91■□□□□ 0.94
Syce3B5KM66 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syce3B5KM66 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.91■□□□□ 0.94
Syce3B5KM66 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syce3B5KM66 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syce3B5KM66 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Syce3B5KM66 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syce3B5KM66 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Syce3B5KM66 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Syce3B5KM66 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syce3B5KM66 Spcs1-204ENSMUST00000226782 949 ntBASIC20.9■□□□□ 0.94
Syce3B5KM66 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Syce3B5KM66 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syce3B5KM66 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syce3B5KM66 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Syce3B5KM66 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Syce3B5KM66 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Syce3B5KM66 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Syce3B5KM66 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Syce3B5KM66 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Syce3B5KM66 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.89■□□□□ 0.93
Syce3B5KM66 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Syce3B5KM66 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.89■□□□□ 0.93
Syce3B5KM66 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Syce3B5KM66 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Syce3B5KM66 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Syce3B5KM66 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Syce3B5KM66 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Syce3B5KM66 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Syce3B5KM66 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Syce3B5KM66 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.88■□□□□ 0.93
Syce3B5KM66 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Syce3B5KM66 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syce3B5KM66 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syce3B5KM66 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Syce3B5KM66 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syce3B5KM66 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Syce3B5KM66 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syce3B5KM66 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syce3B5KM66 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syce3B5KM66 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.88■□□□□ 0.93
Syce3B5KM66 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syce3B5KM66 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
Syce3B5KM66 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Syce3B5KM66 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syce3B5KM66 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syce3B5KM66 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Syce3B5KM66 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Syce3B5KM66 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syce3B5KM66 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.88■□□□□ 0.93
Syce3B5KM66 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Syce3B5KM66 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Syce3B5KM66 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Syce3B5KM66 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Syce3B5KM66 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Syce3B5KM66 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Syce3B5KM66 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Syce3B5KM66 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.87■□□□□ 0.93
Syce3B5KM66 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
Syce3B5KM66 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Syce3B5KM66 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Syce3B5KM66 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.86■□□□□ 0.93
Syce3B5KM66 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Syce3B5KM66 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Syce3B5KM66 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.86■□□□□ 0.93
Syce3B5KM66 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Syce3B5KM66 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Syce3B5KM66 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Syce3B5KM66 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syce3B5KM66 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syce3B5KM66 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Syce3B5KM66 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syce3B5KM66 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.85■□□□□ 0.93
Syce3B5KM66 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syce3B5KM66 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syce3B5KM66 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syce3B5KM66 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.85■□□□□ 0.93
Syce3B5KM66 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.85■□□□□ 0.93
Syce3B5KM66 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.85■□□□□ 0.93
Syce3B5KM66 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Syce3B5KM66 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syce3B5KM66 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syce3B5KM66 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.85■□□□□ 0.93
Syce3B5KM66 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Syce3B5KM66 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syce3B5KM66 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syce3B5KM66 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Syce3B5KM66 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syce3B5KM66 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Syce3B5KM66 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Syce3B5KM66 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Syce3B5KM66 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Syce3B5KM66 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Syce3B5KM66 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Syce3B5KM66 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Syce3B5KM66 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Syce3B5KM66 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Syce3B5KM66 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms