Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a6B1AVK5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.98■□□□□ 0.63
Col4a6B1AVK5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a6B1AVK5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a6B1AVK5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a6B1AVK5 Gm27741-201ENSMUST00000185060 237 ntBASIC18.98■□□□□ 0.63
Col4a6B1AVK5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.98■□□□□ 0.63
Col4a6B1AVK5 Gm33142-201ENSMUST00000193913 867 ntBASIC18.98■□□□□ 0.63
Col4a6B1AVK5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a6B1AVK5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a6B1AVK5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
Col4a6B1AVK5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a6B1AVK5 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a6B1AVK5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a6B1AVK5 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a6B1AVK5 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a6B1AVK5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a6B1AVK5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a6B1AVK5 Gm45058-201ENSMUST00000205810 766 ntBASIC18.97■□□□□ 0.63
Col4a6B1AVK5 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a6B1AVK5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Col4a6B1AVK5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Col4a6B1AVK5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a6B1AVK5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.97■□□□□ 0.63
Col4a6B1AVK5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.97■□□□□ 0.63
Col4a6B1AVK5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a6B1AVK5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Col4a6B1AVK5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Col4a6B1AVK5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a6B1AVK5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.96■□□□□ 0.63
Col4a6B1AVK5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.96■□□□□ 0.63
Col4a6B1AVK5 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.96■□□□□ 0.63
Col4a6B1AVK5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a6B1AVK5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a6B1AVK5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a6B1AVK5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a6B1AVK5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a6B1AVK5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a6B1AVK5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a6B1AVK5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a6B1AVK5 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a6B1AVK5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a6B1AVK5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a6B1AVK5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a6B1AVK5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Col4a6B1AVK5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Col4a6B1AVK5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a6B1AVK5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a6B1AVK5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a6B1AVK5 Gm38027-201ENSMUST00000192315 235 ntBASIC18.95■□□□□ 0.62
Col4a6B1AVK5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a6B1AVK5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a6B1AVK5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a6B1AVK5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a6B1AVK5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a6B1AVK5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a6B1AVK5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Col4a6B1AVK5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a6B1AVK5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a6B1AVK5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a6B1AVK5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.93■□□□□ 0.62
Col4a6B1AVK5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a6B1AVK5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a6B1AVK5 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.93■□□□□ 0.62
Col4a6B1AVK5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a6B1AVK5 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Col4a6B1AVK5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a6B1AVK5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a6B1AVK5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a6B1AVK5 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.93■□□□□ 0.62
Col4a6B1AVK5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Col4a6B1AVK5 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a6B1AVK5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Col4a6B1AVK5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a6B1AVK5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a6B1AVK5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a6B1AVK5 AA414768-201ENSMUST00000121924 1257 ntBASIC18.92■□□□□ 0.62
Col4a6B1AVK5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a6B1AVK5 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.92■□□□□ 0.62
Col4a6B1AVK5 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.92■□□□□ 0.62
Col4a6B1AVK5 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.92■□□□□ 0.62
Col4a6B1AVK5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a6B1AVK5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a6B1AVK5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a6B1AVK5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Col4a6B1AVK5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.92■□□□□ 0.62
Col4a6B1AVK5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a6B1AVK5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a6B1AVK5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.92■□□□□ 0.62
Col4a6B1AVK5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a6B1AVK5 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.92■□□□□ 0.62
Col4a6B1AVK5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a6B1AVK5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Col4a6B1AVK5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a6B1AVK5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a6B1AVK5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Col4a6B1AVK5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a6B1AVK5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a6B1AVK5 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a6B1AVK5 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms