Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lnp1A0A1B0GSK3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Lnp1A0A1B0GSK3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lnp1A0A1B0GSK3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Lnp1A0A1B0GSK3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Lnp1A0A1B0GSK3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lnp1A0A1B0GSK3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Lnp1A0A1B0GSK3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lnp1A0A1B0GSK3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lnp1A0A1B0GSK3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Lnp1A0A1B0GSK3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.18■□□□□ 0.02
Lnp1A0A1B0GSK3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lnp1A0A1B0GSK3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Lnp1A0A1B0GSK3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lnp1A0A1B0GSK3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lnp1A0A1B0GSK3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lnp1A0A1B0GSK3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lnp1A0A1B0GSK3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Lnp1A0A1B0GSK3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lnp1A0A1B0GSK3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lnp1A0A1B0GSK3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lnp1A0A1B0GSK3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lnp1A0A1B0GSK3 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.17■□□□□ 0.02
Lnp1A0A1B0GSK3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lnp1A0A1B0GSK3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lnp1A0A1B0GSK3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Lnp1A0A1B0GSK3 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Lnp1A0A1B0GSK3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms