Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Gm12922-201ENSMUST00000120626 809 ntBASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv1-88A0A140T8N1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv1-88A0A140T8N1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv1-88A0A140T8N1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Gm43137-201ENSMUST00000198052 594 ntBASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Gm43182-201ENSMUST00000199476 2528 ntBASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC12.05□□□□□ -0.48
Igkv1-88A0A140T8N1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms