Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6d-7A0A075B6B0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-7A0A075B6B0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Gm13234-201ENSMUST00000120010 747 ntBASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Gm10033-202ENSMUST00000211874 928 ntBASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav6d-7A0A075B6B0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6d-7A0A075B6B0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-7A0A075B6B0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-7A0A075B6B0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-7A0A075B6B0 Gm29257-201ENSMUST00000186115 639 ntBASIC14.08□□□□□ -0.16
Trav6d-7A0A075B6B0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav6d-7A0A075B6B0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav6d-7A0A075B6B0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-7A0A075B6B0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-7A0A075B6B0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-7A0A075B6B0 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.08□□□□□ -0.16
Trav6d-7A0A075B6B0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-7A0A075B6B0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-7A0A075B6B0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.08□□□□□ -0.16
Trav6d-7A0A075B6B0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-7A0A075B6B0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-7A0A075B6B0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Gm10849-201ENSMUST00000100397 618 ntBASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Reep4-203ENSMUST00000226563 1444 ntBASIC14.07□□□□□ -0.16
Trav6d-7A0A075B6B0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-7A0A075B6B0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms