Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm3841-201ENSMUST00000191399 451 ntBASIC6.39□□□□□ -1.39
Use1Q9CQ56 Gm37977-201ENSMUST00000193096 721 ntBASIC6.39□□□□□ -1.39
Use1Q9CQ56 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC6.39□□□□□ -1.39
Use1Q9CQ56 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.39□□□□□ -1.39
Use1Q9CQ56 Gm22149-202ENSMUST00000196259 137 ntBASIC6.39□□□□□ -1.39
Use1Q9CQ56 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.39□□□□□ -1.39
Use1Q9CQ56 Gm19185-201ENSMUST00000196365 643 ntBASIC6.39□□□□□ -1.39
Use1Q9CQ56 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.39□□□□□ -1.39
Use1Q9CQ56 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.39□□□□□ -1.39
Use1Q9CQ56 AC139941.1-201ENSMUST00000221517 478 ntBASIC6.39□□□□□ -1.39
Use1Q9CQ56 Gcnt2-204ENSMUST00000223570 335 ntBASIC6.39□□□□□ -1.39
Use1Q9CQ56 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.39□□□□□ -1.39
Use1Q9CQ56 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.39□□□□□ -1.39
Use1Q9CQ56 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Use1Q9CQ56 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Use1Q9CQ56 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.39□□□□□ -1.39
Use1Q9CQ56 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Use1Q9CQ56 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Use1Q9CQ56 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Use1Q9CQ56 Robo2-210ENSMUST00000226478 8059 ntBASIC6.39□□□□□ -1.39
Use1Q9CQ56 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Use1Q9CQ56 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Use1Q9CQ56 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Use1Q9CQ56 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Use1Q9CQ56 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Use1Q9CQ56 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Use1Q9CQ56 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Use1Q9CQ56 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Use1Q9CQ56 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm25311-201ENSMUST00000104136 132 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm17184-201ENSMUST00000111864 462 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm8534-201ENSMUST00000118553 766 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm12331-201ENSMUST00000119927 622 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm23139-201ENSMUST00000179454 132 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm27019-201ENSMUST00000183056 404 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm27684-201ENSMUST00000183778 80 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm29197-201ENSMUST00000185922 702 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm28801-201ENSMUST00000188761 449 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm44590-201ENSMUST00000206161 391 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm2221-201ENSMUST00000209342 418 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm18860-201ENSMUST00000212029 764 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm17950-201ENSMUST00000214617 646 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 AC160338.3-201ENSMUST00000214836 384 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Use1Q9CQ56 AC140451.1-201ENSMUST00000227984 737 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Use1Q9CQ56 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.38□□□□□ -1.39
Use1Q9CQ56 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Use1Q9CQ56 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.37□□□□□ -1.39
Use1Q9CQ56 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Use1Q9CQ56 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms