Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm27013-202ENSMUST00000205067 1436 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm6767-201ENSMUST00000118650 1381 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm45528-201ENSMUST00000209854 3145 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm25167-201ENSMUST00000104188 120 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm25273-201ENSMUST00000104295 115 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm23323-201ENSMUST00000104471 133 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm13988-201ENSMUST00000119363 288 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm15712-201ENSMUST00000120369 1156 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm14800-201ENSMUST00000122084 1272 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm4835-201ENSMUST00000155839 972 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm25271-201ENSMUST00000157273 290 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm4781-201ENSMUST00000167995 781 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm25082-201ENSMUST00000177296 255 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm28688-201ENSMUST00000187301 268 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm7200-201ENSMUST00000188426 1163 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm29008-201ENSMUST00000189387 298 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Ighv5-21-201ENSMUST00000191935 295 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm37392-201ENSMUST00000192098 516 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm18611-201ENSMUST00000200334 1118 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 AC123534.1-201ENSMUST00000224060 656 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 AC164116.2-201ENSMUST00000225398 1038 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 AC114008.1-201ENSMUST00000226193 937 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 AC102603.1-201ENSMUST00000227481 584 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm5316-201ENSMUST00000050391 270 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Mir24-2-201ENSMUST00000083607 107 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Olfr687-201ENSMUST00000098154 938 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.4□□□□□ -1.07
Trim11Q99PQ2 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.07
Trim11Q99PQ2 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim11Q99PQ2 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim11Q99PQ2 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Trim11Q99PQ2 Gm37906-201ENSMUST00000192050 3035 ntBASIC8.4□□□□□ -1.07
Trim11Q99PQ2 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim11Q99PQ2 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Trim11Q99PQ2 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm6300-201ENSMUST00000192393 1498 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm22438-201ENSMUST00000104049 132 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm11406-201ENSMUST00000117418 484 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm15048-201ENSMUST00000118201 954 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm14645-201ENSMUST00000118597 417 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm14202-201ENSMUST00000120121 311 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm5125-201ENSMUST00000148614 624 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm25437-201ENSMUST00000158282 132 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Mir6930-201ENSMUST00000183859 68 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm38166-201ENSMUST00000191660 471 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm37632-201ENSMUST00000191811 1142 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm38061-201ENSMUST00000192490 365 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm44192-201ENSMUST00000204195 556 ntBASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim11Q99PQ2 Gm7151-201ENSMUST00000211511 954 ntBASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms