Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm14869-201ENSMUST00000119007 884 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm14631-201ENSMUST00000119067 594 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm14251-201ENSMUST00000122133 279 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm22588-201ENSMUST00000157510 140 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm26183-201ENSMUST00000157685 139 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm6434-201ENSMUST00000163316 372 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm4613-201ENSMUST00000165488 276 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.71□□□□□ -1.34
Msh4Q99MT2 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Msh4Q99MT2 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Mir6241-201ENSMUST00000184225 103 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Mir6987-201ENSMUST00000184789 73 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm28413-201ENSMUST00000189369 291 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm10416-201ENSMUST00000197379 645 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm4525-201ENSMUST00000198831 254 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm42883-201ENSMUST00000202594 222 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm43894-201ENSMUST00000203274 688 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.71□□□□□ -1.34
Msh4Q99MT2 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm5080-201ENSMUST00000220341 743 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm9231-201ENSMUST00000220817 1009 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm10126-201ENSMUST00000221732 168 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
Msh4Q99MT2 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Msh4Q99MT2 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm22005-201ENSMUST00000082795 141 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm23734-201ENSMUST00000083753 109 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Msh4Q99MT2 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Msh4Q99MT2 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Msh4Q99MT2 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Msh4Q99MT2 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Msh4Q99MT2 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Msh4Q99MT2 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Msh4Q99MT2 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.71□□□□□ -1.34
Msh4Q99MT2 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm22781-201ENSMUST00000104083 137 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm25311-201ENSMUST00000104136 132 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm26417-201ENSMUST00000104274 135 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm14864-201ENSMUST00000116164 1087 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm13878-201ENSMUST00000117986 577 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm13196-201ENSMUST00000118297 379 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm15316-201ENSMUST00000121082 421 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm29383-201ENSMUST00000188284 480 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm5066-201ENSMUST00000188479 822 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Ighv1-30-201ENSMUST00000194082 349 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm43382-201ENSMUST00000198954 838 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm18330-201ENSMUST00000199246 547 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Igkv4-77-201ENSMUST00000199410 352 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm44943-201ENSMUST00000207254 300 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm44548-201ENSMUST00000208929 192 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm45739-201ENSMUST00000213094 388 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC6.7□□□□□ -1.34
Msh4Q99MT2 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm6887-201ENSMUST00000080945 482 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm26063-201ENSMUST00000083378 107 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.7□□□□□ -1.34
Msh4Q99MT2 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Msh4Q99MT2 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms