Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Gm8667-201ENSMUST00000211112 449 ntBASIC6.74□□□□□ -1.33
Clrn1Q8K445 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC6.74□□□□□ -1.33
Clrn1Q8K445 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC6.74□□□□□ -1.33
Clrn1Q8K445 CT030166.4-201ENSMUST00000220640 404 ntBASIC6.74□□□□□ -1.33
Clrn1Q8K445 AC139941.1-201ENSMUST00000221517 478 ntBASIC6.74□□□□□ -1.33
Clrn1Q8K445 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Olfr1153-201ENSMUST00000052300 957 ntBASIC6.74□□□□□ -1.33
Clrn1Q8K445 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Gm10247-201ENSMUST00000090395 333 ntBASIC6.74□□□□□ -1.33
Clrn1Q8K445 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Gm37067-201ENSMUST00000195730 1628 ntBASIC6.74□□□□□ -1.33
Clrn1Q8K445 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC6.74□□□□□ -1.33
Clrn1Q8K445 Gm43872-201ENSMUST00000203218 2213 ntBASIC6.74□□□□□ -1.33
Clrn1Q8K445 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Clrn1Q8K445 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Clrn1Q8K445 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 AC129208.1-201ENSMUST00000227474 2906 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm25083-201ENSMUST00000102319 92 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm14000-201ENSMUST00000118670 233 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm15484-201ENSMUST00000118871 828 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm5135-201ENSMUST00000121100 573 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm25178-201ENSMUST00000122633 325 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm27018-201ENSMUST00000181136 225 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm5147-201ENSMUST00000185999 794 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm37322-201ENSMUST00000193409 337 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm37908-201ENSMUST00000195828 470 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm4605-201ENSMUST00000203148 625 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm4602-201ENSMUST00000203198 308 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm5314-201ENSMUST00000204852 466 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm44258-201ENSMUST00000204925 301 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 AL929265.1-201ENSMUST00000213427 125 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm19233-201ENSMUST00000219772 936 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm18960-201ENSMUST00000222962 713 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 AC163631.1-201ENSMUST00000225041 598 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 AC183092.2-201ENSMUST00000225542 1153 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 AC161877.2-201ENSMUST00000226248 545 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm16020-201ENSMUST00000084281 210 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm42490-201ENSMUST00000198595 2064 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm42455-201ENSMUST00000199761 2736 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gm6640-201ENSMUST00000120629 1587 ntBASIC6.73□□□□□ -1.33
Clrn1Q8K445 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms