Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Mir290a-201ENSMUST00000104627 83 ntBASIC7.12□□□□□ -1.27
CopaQ8CIE6 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Mir1930-201ENSMUST00000158799 84 ntBASIC7.12□□□□□ -1.27
CopaQ8CIE6 Gm22533-201ENSMUST00000158821 274 ntBASIC7.12□□□□□ -1.27
CopaQ8CIE6 Gm16113-201ENSMUST00000159629 372 ntBASIC7.12□□□□□ -1.27
CopaQ8CIE6 Gm8550-201ENSMUST00000161621 653 ntBASIC7.12□□□□□ -1.27
CopaQ8CIE6 Gm24157-201ENSMUST00000175265 111 ntBASIC7.12□□□□□ -1.27
CopaQ8CIE6 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Gm9127-201ENSMUST00000188041 985 ntBASIC7.12□□□□□ -1.27
CopaQ8CIE6 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Ighv1-29-201ENSMUST00000194116 342 ntBASIC7.12□□□□□ -1.27
CopaQ8CIE6 Gm37526-201ENSMUST00000194640 619 ntBASIC7.12□□□□□ -1.27
CopaQ8CIE6 Gm43595-201ENSMUST00000196464 1071 ntBASIC7.12□□□□□ -1.27
CopaQ8CIE6 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.12□□□□□ -1.27
CopaQ8CIE6 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Gm44251-201ENSMUST00000204963 442 ntBASIC7.12□□□□□ -1.27
CopaQ8CIE6 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CopaQ8CIE6 AC124778.1-201ENSMUST00000216013 162 ntBASIC7.12□□□□□ -1.27
CopaQ8CIE6 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 AC121804.1-201ENSMUST00000221016 394 ntBASIC7.12□□□□□ -1.27
CopaQ8CIE6 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.12□□□□□ -1.27
CopaQ8CIE6 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
CopaQ8CIE6 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.11□□□□□ -1.27
CopaQ8CIE6 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CopaQ8CIE6 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm38368-201ENSMUST00000193181 1335 ntBASIC7.11□□□□□ -1.27
CopaQ8CIE6 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm22231-201ENSMUST00000101027 73 ntBASIC7.11□□□□□ -1.27
CopaQ8CIE6 n-R5s172-201ENSMUST00000104508 114 ntBASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm13137-201ENSMUST00000118035 345 ntBASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm6027-201ENSMUST00000121467 756 ntBASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm13366-201ENSMUST00000122198 970 ntBASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm14503-201ENSMUST00000130337 1164 ntBASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm15501-202ENSMUST00000140687 625 ntBASIC7.11□□□□□ -1.27
CopaQ8CIE6 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CopaQ8CIE6 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm27178-201ENSMUST00000184962 340 ntBASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm37295-201ENSMUST00000192186 109 ntBASIC7.11□□□□□ -1.27
CopaQ8CIE6 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm38840-201ENSMUST00000204716 843 ntBASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm44971-201ENSMUST00000206192 337 ntBASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 AV026068-219ENSMUST00000224148 933 ntBASIC7.11□□□□□ -1.27
CopaQ8CIE6 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.11□□□□□ -1.27
CopaQ8CIE6 Gm44220-201ENSMUST00000203784 2487 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms