Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm43410-201ENSMUST00000197510 2234 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm43421-201ENSMUST00000200044 2905 ntBASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm44661-201ENSMUST00000208830 3503 ntBASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm24473-201ENSMUST00000104483 131 ntBASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm23031-201ENSMUST00000157998 119 ntBASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm24545-201ENSMUST00000158651 85 ntBASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm20491-201ENSMUST00000173765 1241 ntBASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm21392-201ENSMUST00000182950 972 ntBASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm27782-201ENSMUST00000185059 199 ntBASIC8.2□□□□□ -1.1
Brf1Q8CFK2 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm29141-201ENSMUST00000190357 882 ntBASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm17822-201ENSMUST00000204307 351 ntBASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm18914-201ENSMUST00000214625 616 ntBASIC8.2□□□□□ -1.1
Brf1Q8CFK2 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Mylf-ps-201ENSMUST00000222174 421 ntBASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 AC161275.1-201ENSMUST00000224668 208 ntBASIC8.2□□□□□ -1.1
Brf1Q8CFK2 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm37310-201ENSMUST00000195237 2968 ntBASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brf1Q8CFK2 Gm37945-201ENSMUST00000192536 4367 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm18632-201ENSMUST00000222597 2087 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm13626-201ENSMUST00000119435 402 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm14796-201ENSMUST00000121216 959 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm25395-201ENSMUST00000157343 272 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm25556-201ENSMUST00000158077 144 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm23810-201ENSMUST00000175150 74 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm27156-201ENSMUST00000184589 754 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm36965-201ENSMUST00000193797 394 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm6077-201ENSMUST00000196008 499 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm19175-201ENSMUST00000199895 916 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm44252-201ENSMUST00000204187 330 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm18112-201ENSMUST00000219862 1195 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 AC132433.1-201ENSMUST00000221553 1101 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 CT030705.2-201ENSMUST00000225301 556 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm25587-201ENSMUST00000082498 166 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms